Phragmites australis (common reed): 133885002
Help
Entry
133885002 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133885002 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
paua
Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133885002
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
133885002
REST complex
133885002
Heterochromatin formation proteins
Other heterochromatin formation proteins
133885002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3_corepress
Sin3a_C
PAH
Motif
Other DBs
NCBI-GeneID:
133885002
NCBI-ProteinID:
XP_062180608
LinkDB
All DBs
Position
11:complement(33906674..33912116)
Genome browser
AA seq
889 aa
AA seq
DB search
MIQKMAPPDEPRGDNDRLKRALETHSMESVRFLILAKEELGDYAYSYLIKTVQEIVEQCS
SNPDGGITVEKCEEILSEVFVDRTRLLNSFHHFLEARDPFHDDLQLVPNPVSFLAKVKAS
PYISNEDYNDLLTTLCQFGTTRTMTVEDVYNKVKRVMHQCPEFIEIFKTYLPPHLRLPLP
NEQSCRSPKTSPAVKAVLSFTPDATHSLDGIRVKATNIMNKVSQPEYHHDQNPKSVEFSF
RQEPTQRIPYSVRMPRKGGNGESLHAEEDEGDKMDPLPDWSPSRANDLPPKVDLNICTPC
TPRYHLLPENCITLQSSYRTELGRSIFNDTLVSVTSGREDCFKFRTKNLYEENIFKCEDD
MFESDMLLQRFIATADFIRNLQDRVDSDMKIQEHLTPLHRRCIEQLYDDRGLDMLDALSE
TDSTSGTLALLHYRLNQKIEDLSEARSSLNKTCSSIISYNYYRSLDHRSSSFKQLDNRRM
SPKALLAEAKEINMTRLNDGDKHLSSACNKQSRLISEGLLDHSNLHIHEDIHSIVCYAFK
TWCPSEHKPVMIWTKLVQPFVSVSCKMPELNGTVAPKEACERCGLSRTFLRSIPNALLAN
NFPLSSKRGGCLGNTSNKSTSIHDGCKAEIEEGEFIPDIENIELDSMLGLGNDVAAPNGD
VSSFQCQGHSICDHGNKSEVHHESREGSNVEMGSLAYSKRIAELRDVKGGIPCCSLVVLC
RLNQILYERLLVAKVLSREASAKALPRGSRTCDLYAEFQEELFKLIDRSTDNSKFEEYCL
NFLGPGSYILFTLDKLISLVIKQLCRICPTDEDNMLIQLNEKVRRRNLSEDLLRHQNARS
SPAHQTNGSLEQDPKEGWKGGNPLDDTVKLTQNHFQRRKRRKMENGAAS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaatggcgcctcccgacgagccccgtggtgacaacgatcggctcaaaagg
gcgctggagacgcacagcatggagtccgtgcggttcctcatccttgctaaggaggaactc
ggcgactacgcatacagttacctcatcaagaccgtacaagagattgtggaacaatgcagt
tcaaatcctgatggcggaatcacggtcgaaaaatgcgaagagattctgtcagaagtgttt
gttgaccggactcggctcctaaacagtttccatcacttcctcgaagcgcgtgatcccttc
cacgacgacctgcagcttgtaccgaatccagtatctttccttgcgaaagtgaaggcatcc
ccttatatatcaaatgaagattataatgatttactgaccaccctgtgccagtttgggacc
acaaggaccatgaccgttgaagatgtttacaacaaggtgaagagagtcatgcatcagtgt
cccgagtttatagaaatcttcaaaacttatctgcctcctcacctaaggttgcctctacca
aatgagcaatcctgcagaagtccaaagactagtcctgcagtcaaggcggttttaagcttt
actccagatgccactcatagcttggatggtatccgagtgaaagcaaccaatatcatgaat
aaagtgtctcaacctgagtatcaccacgaccaaaaccctaaaagcgtagagttcagtttc
aggcaggaaccaactcagaggatcccttactctgttcgaatgcctagaaagggaggtaat
ggagaatcacttcatgcagaagaggatgagggggacaagatggatcctttgccagattgg
agtccctcaagagcaaacgatttaccccccaaagtggatctcaatatttgcacaccttgc
actcctagatatcaccttctaccggagaattgcataacacttcaatcaagttaccggact
gaactgggaaggtcgatttttaacgacacattggtttctgttacctctgggcgtgaggat
tgctttaaattcagaactaaaaatctatatgaagaaaacattttcaagtgtgaagatgac
atgtttgagagtgacatgctgttgcagcgcttcatagcaactgctgactttattagaaat
ctccaagaccgtgttgacagcgacatgaaaattcaagagcatttaactcccttacataga
aggtgcattgaacagttatatgatgatcgtggcctcgacatgcttgatgctctgtcggag
actgatagtaccagtggaactcttgcacttctgcattatcgtttaaatcagaagatagaa
gatttgtcagaggcacggtcatctttgaataaaacatgctcaagtattatttcctataat
tactacagatcacttgatcatcgcagctcctccttcaaacaattggacaataggaggatg
agcccaaaagctttgcttgctgaagccaaagaaatcaatatgacaaggttgaatgatgga
gataaacatctttcttctgcttgcaacaagcaatctcgtttgatttctgaaggtttactt
gatcatagcaatcttcacatccatgaggacatacacagcatagtttgttatgcattcaag
acatggtgtccttctgaacataagccggtgatgatttggacaaaattagttcagccattt
gtttctgttagttgtaaaatgccagagttgaatggaactgtagctcccaaagaagcttgt
gaacgttgtggtctcagcagaacttttctcaggagcatccctaatgctttgcttgctaat
aattttcctttatcttcaaagagaggtggatgtcttggaaacacgtctaataagtctact
tctatacacgatggttgtaaggcagagattgaggagggtgaattcataccagatatcgaa
aacatcgagttggactccatgcttgggcttgggaatgatgttgctgctcccaatggagat
gtgtcgagttttcagtgccaaggtcatagtatttgtgaccatggtaataaatctgaagtg
catcacgaatcaagagaaggctccaatgttgaaatgggcagtttagcatattccaaaaga
atagctgaactgcgtgatgtaaaaggcggcataccttgttgttctctggttgtgctctgc
aggcttaaccagattttgtatgagagactactagtcgctaaggttctttcaagagaagca
agtgctaaagctctcccgagaggttcacgcacctgtgatttatatgcagagtttcaggag
gaactctttaagctgattgatagatctactgacaattccaaatttgaggagtactgcctg
aatttccttgggccgggatcatatatactgtttactctagataagctgataagtctagtt
atcaagcagctttgcagaatttgcccaactgatgaagacaacatgcttattcagctcaat
gagaaagtgagaagacggaacctatctgaagatttattacgccatcaaaatgcaagaagc
tctccagctcatcaaacaaatgggtcactggagcaagatccaaaggagggatggaaaggt
ggcaatcctcttgacgatactgttaaactgacgcaaaaccattttcagagaaggaaaagg
cgcaagatggagaacggtgcagcgagctga
DBGET
integrated database retrieval system
