Phragmites australis (common reed): 133885004
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Entry
133885004 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133885004
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
HECT type E3
133885004
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GFIT
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NCBI-GeneID:
133885004
NCBI-ProteinID:
XP_062180615
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Position
11:1364912..1371591
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AA seq
1366 aa
AA seq
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MEVDEQAGAAVMAYALASIADEAAGAGETAAALAVLCDVLAISGPDLILTIPSAGLARRL
PALVASAAGGEGDVPLLAARAMAEAVEGAPQWAARFAQNGAVEALRGRLLAIDYIELAEE
EASLCLCIWQCLRALDAISLQCPDDCLRRGVAAAVLQFFDFFSTSKQKVALRIVSNIFND
YDEEYAPTVMEAVPALCNLLQSADKTILESTISCLAMAAAGASGNAEHMGKLCESNAVEA
TMSLMNNDGWKSISDDTLTGILGLLKNLASVSAKAVKSLFELDVCELLKQMITYYSSPHN
ENDKLQMLVKLIYQLMPPLETSDQHAELVTAKKNVIIEQTTYIHQLTSVVTLIIQVAKCA
ALSSICYNCVVVISNIVELSTSTFLMELQKTVNLSSFLACLLARKNRHVVFQTLKISRTL
LEKHHQFFFETFTKEGVKHAIDAIVSQEKNSSHQSKRKNNTQESCLCFDLYLESSSTDEA
CRIENNAVMKLAEDIKESFLAVKGSKKSPHRFGFALKSVRDFFARLNVHAVTTPAENPDS
CKQLSDLSRRLLSDELPVTSTFEFVESGIIKYLAGYLSNDAYVNANLQNGQDLLGQLNEV
RSRLQKFTYLALTVSDESSGKPLGILVEKLLDALHMCYDSFPVMLSDEQSARESMMIPLR
YPEEPTTLELKFRRSQREKELRNYDDVRSVSLFSTPDAIEAVLLTEICKRTDQEPASNSK
KSNQEKESNQSRKLVESKNGDGNRSSSLKFSYNGTKLQPSATFFESILRLMNKGQSDLSI
DPYFWDEEHKITYRRRNKSKDLSSRSSYNSQLSQVHEKFQQSWLKDPFFSTILLGNLPGH
LDVSDPSYNFLFMLKVLEGLNRFSYQLLMDEQICKFAEGALRDINDLKVAISPIPQHQFM
SSLLTNKLELQMQDSLFEDGLIPSWCVYLVENCPFLLSFDTRWKYFCLTAHRSFMTDQVN
STPDQVNSHPDQVKSPPQTKKYRVTRSSILEGAVSMMTNHDPSSRIVEVEFEGEVGTGRG
PTFEFYTTISHELQRAELGMWRGDSSESGFMHAPFGLFPKPWSSSSTSSREIEFSNVLQK
FKLLGHLVVRAVLDGRILDIPLSKAFYKIMLEQELDIYDIPSFDPELGKAVIEFQALDNR
KKFLETSSRTFNPTDDLSYKNVKMEDLCLDFTLPGNPEYELVPGGSENMVTLDNLEEYVY
LVLDATLKSGIAKQIEAFKSGINEVLAIKTLKMFTEEEMERVLCGEHDSWASKNLEDHIE
FEHGYDTSSQSIINFLEILREFGREDQRAFIQFTTGAPQLPLGGLASLDPKLTVVRKQCD
GNVDDELPSVNTCRHFIKLPPYSSKEIMRKKLQYAFTEGLGSFHLS
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacgagcaggcgggtgcggcggtgatggcgtacgctctggcctcgatcgcc
gacgaggccgcgggcgcgggggagaccgcggccgcgctcgccgtgctctgcgacgtgctc
gcgatctccggcccggacctcatcctcaccatcccctccgcggggctagccaggcgcctc
cccgccctcgtcgcctccgccgcgggaggggaaggcgacgtgccgctgctcgccgcgcgc
gccatggccgaggccgtcgagggggcgccgcagtgggccgcgcgcttcgcgcagaacggc
gccgtcgaggcgctccgcggcaggctgctcgccatcgactacatcgagcttgccgaggag
gaggcttccctttgtctttgtatttggcagtgcttgcgagctctggacgcgatatcttta
caatgccctgacgattgcctccgccgtggggtggcagctgctgtgctacagttcttcgac
ttcttttcaacgagcaagcagaaagtggcactccggatcgtctcaaatattttcaatgat
tacgatgaagagtatgcacccacggtcatggaggctgtgcctgctctgtgcaacctcctg
caatctgctgataagacgatactcgaatccactatttcttgcttggcaatggccgctgct
ggcgcttccggaaatgctgaacacatgggaaagctatgcgaatctaatgcagtcgaggca
acgatgagcttgatgaataacgatgggtggaagagcatcagtgatgataccttaactggc
attcttgggctgctgaaaaatcttgcttccgtctctgcaaaggctgtgaagtctcttttc
gagttagatgtttgtgaattgctcaagcagatgataacttattatagttccccgcacaat
gagaatgataagttgcagatgcttgtcaagctcatataccagcttatgccacctctcgaa
acatctgatcaacacgctgaactagtcactgcaaagaaaaatgtcatcatagaacaaaca
acatacattcaccagcttactagcgtcgttacccttataatacaggttgcaaaatgtgct
gcactatcatcaatttgctacaactgtgtcgttgtcatcagcaacattgttgaattaagc
acctctactttcctgatggagttacagaagactgtaaatctctcaagctttcttgcttgt
ttgttggcccggaaaaaccgtcatgttgtgttccaaacactcaagatttcaaggaccctc
ctggaaaaacaccaccagtttttctttgagacctttaccaaggagggtgtgaagcatgca
attgatgcaatagtatcacaagaaaaaaactcaagtcaccagtcaaaaagaaagaacaac
acgcaagaaagttgcctttgctttgacctttacttggagtcttcctcaactgatgaggca
tgcaggattgagaacaatgctgtcatgaaactagcagaagatataaaggaaagcttcttg
gcggtgaaaggaagtaaaaaatctcctcataggtttggatttgctcttaaaagtgtcaga
gacttttttgctaggttgaatgttcatgccgtgacaacccctgctgaaaatccagatagc
tgcaaacagttgtctgatctttcaaggagattattgtcagatgaactgccagttacttct
acttttgagtttgtagagagtgggattatcaaatatttggcaggttatctctcaaacgat
gcatacgtcaatgcaaatctccagaatggacaggatttgctagggcagcttaatgaggtg
cggagtcggctgcagaaattcacctatttggctctcaccgtgtcagatgaaagctcaggg
aagccccttgggattttggtggagaagctactagacgccttgcacatgtgctatgacagt
tttcctgtaatgctatctgatgaacagtctgcacgtgagagcatgatgattccgctgaga
tatcctgaggaaccaacgacactggagttaaaatttcgaaggtcgcagagggagaaggaa
ttgcgcaattatgatgatgttcgcagtgtcagccttttctcaacacctgatgccattgaa
gcagttctcttgactgagatttgtaaaagaactgatcaggaacctgcatccaattccaag
aaatccaatcaagagaaggaatcaaatcaaagcagaaagttagtcgagtccaaaaatggt
gacgggaacagatcctcaagtctgaaattctcttacaatggcacgaaactccagccatct
gcaacattttttgagtcaatcctccgtctaatgaacaagggacaatctgatctatcgatt
gacccatatttctgggatgaagaacacaaaataacatataggaggagaaacaaaagcaag
gatctctcttcccggagttcctataattctcagttatcccaggtgcacgaaaagtttcag
caatcatggctgaaggacccatttttctctaccatacttcttggcaaccttcctggtcat
ctggatgtgtctgatccatcatacaatttcttgttcatgctgaaagttcttgaagggctg
aaccgtttttcatatcaactgttgatggatgaacagatatgcaaatttgctgaaggcgct
ctacgagatataaatgatcttaaggtggcaatttctccaattccacagcatcagttcatg
agcagtcttctgacgaataagctagaactgcaaatgcaagatagcttgtttgaggatggc
ctcataccctcatggtgtgtctatctggttgagaattgcccattcctgttgtccttcgac
acgcggtggaagtacttctgcctgactgcgcatcgctcattcatgacagaccaggttaac
agtactccggaccaggttaacagtcatccagaccaggttaagagtcctccacaaactaaa
aagtacagagtaacccggagttctatccttgaaggtgctgtatcaatgatgaccaatcat
gatccaagcagcagaatcgttgaggtggaattcgaaggagaggttgggactgggcgaggt
ccaacattcgaattctacactacaatttctcatgaacttcaaagagccgagcttggaatg
tggagaggagacagcagtgaatctggcttcatgcatgctccttttggactatttccaaag
ccgtggtcgtcatcaagcacttcatcgcgagagattgaattttctaatgtgctacagaaa
ttcaagcttcttgggcatcttgtagtgagagcagttctggatggaaggatccttgacatc
ccactttctaaagcattttacaaaatcatgctcgagcaggagctcgatatatatgacatc
ccatcgtttgatcctgagctgggcaaggcagtaatagagtttcaagcacttgataacagg
aagaagttcttggagacatcttcaagaacatttaaccctactgatgatttgtcctataaa
aacgtgaaaatggaggatttgtgccttgactttactcttcctggaaatcctgaatatgaa
cttgttcctggaggctcggagaacatggtgacacttgacaatttagaggaatatgtatat
ctggttcttgatgcaacactgaagagcggtattgccaagcagatagaagctttcaagtcc
ggaattaatgaggttttggccattaagaccctcaaaatgttcacagaggaagaaatggaa
cgcgtactatgtggtgaacatgattcttgggcttcaaagaaccttgaggatcacattgag
tttgagcatggctatgacacgagcagtcaatcgattattaatttcctggagatattgcgg
gagtttggaagagaggaccagcgggctttcatacaattcactactggagcgcctcaactc
ccgcttggcggcctagcttcgcttgatcccaagctcactgtcgtccgaaagcaatgtgat
ggcaatgtagacgacgaattgccaagtgtcaatacctgccggcactttatcaagctccct
ccttactcctcgaaggagataatgagaaagaagctccaatatgcctttacagagggttta
ggctccttccatttatcatga
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