Phragmites australis (common reed): 133885115
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Entry
133885115 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133885115
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133885115
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133885115
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133885115
03036 Chromosome and associated proteins [BR:
paua03036
]
133885115
03400 DNA repair and recombination proteins [BR:
paua03400
]
133885115
Peptidases and inhibitors [BR:
paua01002
]
Metallo peptidases
Family M67
133885115
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133885115
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
133885115
BRISC complex
133885115
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
133885115
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
133885115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
DUF7310
Spherulin4
Motif
Other DBs
NCBI-GeneID:
133885115
NCBI-ProteinID:
XP_062180748
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All DBs
Position
11:31518627..31521349
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AA seq
219 aa
AA seq
DB search
MDFYSHPDTNHSAKHQPGENAIVAYNPDNAPEASIDPYDSDMTPSIQEALHRSNMDICGA
EYVRKEVPLFVFPTRNLLKLETTLTSYCDMQRVLFEEEQSAYNQAMQQNICDGKIHPLTS
IHHASTYNSSLCKLMEYCLSPAITVLQDRVKENELRLSMLQEEAKQLEAETQSMRNDSPR
RMMNQGAGGSSSPMARNKHPFSSQGSPRSLSGGSRRKAY
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatttctattctcatcctgacacaaatcattcagcaaagcatcaacccggagaaaac
gctattgttgcgtacaatcctgataacgcacctgaagcgtctattgatccttatgattca
gatatgaccccaagcatccaggaggctttgcaccggtcaaatatggacatatgtggtgca
gagtatgtaaggaaggaggtgccactttttgtcttccctacaaggaatctgctaaaactg
gaaaccacattgacttcttactgtgatatgcaacgggtcctttttgaagaggaacagtca
gcatacaatcaagccatgcaacaaaatatttgtgatgggaaaattcaccctcttacatct
attcaccatgcatctacatacaactcttctctctgcaaattaatggagtattgtttgagt
ccagctataactgttcttcaggatcgtgtgaaggaaaatgaacttcggttatctatgtta
caagaggaggctaaacaacttgaggctgagacgcaaagtatgcgaaatgattctcctcgt
cgcatgatgaatcaaggggctggtggcagcagttccccaatggctcggaacaagcatcct
ttctccagccaagggagccctagaagcctgagcggtggcagcaggaggaaggcttattga
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