Phragmites australis (common reed): 133885282
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Entry
133885282 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133885282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133885282
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133885282
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
RRM_1
zf-CCHC_5
zf-CCHC_3
RRM_5
zf-CCHC_4
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
133885282
NCBI-ProteinID:
XP_062180958
LinkDB
All DBs
Position
11:complement(3864430..3868972)
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AA seq
257 aa
AA seq
DB search
MPRYDDHCYRYNWTDRYGRHDGNTKLYVGKISPHTRTHDLVALFSRYGRVRHVNLKGDFG
FVEFCDPRDADDARCDLDGRNFDGSRIIVEFSRGAQRGPGGIPIGPRPVAGICYNCGIDG
HWARDCKAGNWKNRCYRCGEKGHIGRNCQNSPKDLKRGKSYSRSPSPRGRGRGRNYSRSP
SPRHGTGRSRSRSRNYSRLPSPRRDNRNAGDEELPSRCPGYSRRPRKPPPTEQAERHGSY
HGGSPRRGDNRSHSPNY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgatacgacgaccactgttatcgctataattggactgatcgttatggtcgacat
gacggtaacaccaagttgtacgtgggcaagatttctccgcatactaggacacatgatctt
gtggcccttttcagcagatacgggagagtgcggcatgtgaatctgaagggggactttggc
tttgttgagttttgtgatccccgggatgcagatgatgcaaggtgtgaccttgacggccga
aattttgatgggagccgcatcattgttgagttttcaagaggggcccagcgtggtccagga
ggtatccccatcggacctcgtcctgttgctggcatctgctataactgtgggatagatggg
cactgggctcgtgattgcaaagctggtaactggaaaaataggtgctaccggtgtggagaa
aagggccatataggaagaaactgccagaacagtcctaaggatctcaagcgagggaaaagc
tactcaaggtctccatctcctcgtggaagggggcgagggagaaactactccaggtcccca
tctcctcgtcatggaacgggccgaagcaggagccgcagtaggaattacagtcggctgcca
tctccaaggagggataaccgtaatgctggtgatgaagaattgccgtcaagatgccctggt
tacagtcgaagacccaggaaacctccaccaacggagcaagctgaacgccatggttcatat
catggtgggagccccaggagaggtgacaatcggagccatagccccaattactaa
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integrated database retrieval system
