Phragmites australis (common reed): 133885409
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Entry
133885409 CDS
T10575
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133885409
Transcription machinery [BR:
paua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
133885409
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GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
133885409
NCBI-ProteinID:
XP_062181103
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Position
11:33782446..33785023
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AA seq
487 aa
AA seq
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MTSTVTTPSRPLSAGCGRRSAGPRRSGPTVLSLKGPLRRTPSTSCSALASPEKQSTAKLP
PPLPTTTASRTAAPEAERTDYSEVAAALESIYKLSPAVVEEKHDEDNKSMKGKKKRKGRV
GRSTVIVRSRRKRRGRRMDLGKRVEMKSREGDAGGKKEEVREFEEMLLREHSVSTDMGSL
DWKRMKIPPVLSSAQSARLFKTMQPMKAIFEVQESLRDELQREPTDAELAEATNMTMQQL
RRRLDVGRAARNKLIKHNLRLVLYAINKYYPDIANGERFDDLCQAGATGLITAVDRFEPK
RGFRISTYALFWIRHSIVRAMTLSNFTRFPFAMESERQEINKTREELAFELGRTPTDEEV
VKRVGISPARYRDVLRMTKPTYSLHSRNRVTQEELINEVTDDDAIGVDAGKHNTLLRLAI
DDLLDSLKPKESVVIRQRFGLDRRGKRTLTEIAGNLNISREMVRKYELKALMKLKHPTRV
DYLRRYM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgacgcccagccggccgctctccgccgggtgtggccgccgctcg
gccgggccgcgtcgatccgggcctaccgtgctctccctcaaggggccgctgcgacggacg
ccgtccactagctgctcggcgctcgcgtcgcccgagaagcagagcacggccaagctcccg
ccgccgctgccgacgacgacggcgtcgaggaccgcggcgccggaggcggagagaacggac
tacagcgaggtggcggccgcgctggagagcatctacaagctcagccccgccgtggtcgaa
gagaagcacgacgaggacaacaagagcatgaagggcaagaagaagaggaagggcagggtg
ggaaggagcacggtgatcgtgaggagccggaggaagaggcgtgggaggaggatggacctg
gggaagagggtggagatgaagagcagggagggggacgccggcggcaagaaggaggaggtg
cgagagttcgaggagatgctgctcagggagcactcggtgtctacggacatgggcagcctc
gactggaaacgcatgaagatcccgccggtgctcagctccgcgcaaagcgcgcgcctcttc
aaaacgatgcagcccatgaaggcgatctttgaggtgcaagagagcttgcgggacgagcta
cagagggagccgaccgacgcagagctcgcggaggccactaacatgaccatgcagcagctg
cgccgccgcctcgacgtcggccgagccgccaggaacaagctcatcaagcacaatctccgg
ctggtgttgtacgcaatcaacaagtactacccggacatagccaacggcgagaggttcgac
gacctctgccaggccggcgccaccggcctcatcaccgccgtcgaccggttcgagccgaag
cgcgggtttcgcatatcgacctacgctctcttctggatcagacactccatcgtccgcgca
atgacgctctccaacttcacacggttccccttcgccatggaatcggagaggcaggagatt
aacaagacgagggaggagctggcgttcgagctcgggaggacgcccacggacgaagaggtc
gtgaagagggtcgggatatcaccggcgaggtaccgcgacgtgctgaggatgacgaagccg
acctactccctgcactcgcggaaccgcgtgacgcaggaggagctcatcaacgaggtcacc
gacgacgacgccatcggggtcgacgccggcaagcacaacacgctcctccgcctggccatc
gacgatctcctggactctctgaagcccaaggagagcgtggtgatcaggcagcggttcggg
ctggaccgccggggcaagcgcacgctcaccgagatcgccggcaacctcaacatctcgagg
gaaatggtccgcaagtacgagctcaaggccctgatgaagctcaagcaccccacacgagtg
gactacctccgcagatacatgtga
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