Phragmites australis (common reed): 133885656
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Entry
133885656 CDS
T10575
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133885656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133885656
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133885656
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133885656
NCBI-ProteinID:
XP_062181373
LinkDB
All DBs
Position
11:19645667..19651393
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AA seq
278 aa
AA seq
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MTRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED
AIYGRDGYDFDGNRLRVELAHGGRGPSFFDRSSSYSSVGRRGAFRRSDYRVMVTGLPSSA
SWQDLKDHMRRAGDVCFSDVYREAGATIGVADYTNYEDMKRAIRKLDDSEFRNAFSRTYI
RVREYDSKRSRSRSRGRSRSRSNSRSRSRSHSYTRSRSRSYSSSRSPRSRSTSQSKSPDK
ARSPSRSQSAAAASPPCDKSASKSPTRSRSLSRSQVSC
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcggaacagctgcacgatctacgtgggcaatctcccaggcgacatccgtgag
agggaagtagaggatctcttctacaagtatggtcgtattgtggatattgacttgaaaatt
cctccaaggcctcctggttttgcttttgttgagtttgaagacccacgtgatgctgaagat
gcaatttatggtcgtgatggatacgattttgatggcaataggttgcgggtggaattagct
catggtggaagaggaccttctttttttgatcgatcaagcagttatagcagtgttggacga
cgtggtgcatttagacgttctgattaccgcgttatggttactggattaccttcttcagca
tcatggcaagatctcaaggatcatatgcggcgagctggtgatgtgtgtttctctgatgtt
taccgtgaggctggagcaactattggagtagctgattataccaactatgaagatatgaaa
cgtgcgataaggaagcttgatgactcagagtttcgtaatgcattttcacggacatatatc
agggtgcgagaatatgattctaagcgcagccgctcgcgctccagaggcagaagccgtagc
cgctctaactcgagaagcagaagccgcagccactcttacacgagaagcagaagccgcagc
tatagcagtagtaggagtccgagatctaggtctacttctcagtcaaagtcacctgataaa
gcgagatcgccatccagatcccagtcagctgcagctgcttctcccccttgtgacaagtct
gcaagcaagagccccaccaggagcagaagtttgtcccgatctcaagtctcctgctaa
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