Phragmites australis (common reed): 133885672
Help
Entry
133885672 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133885672
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
Brite
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
133885672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133885672
NCBI-ProteinID:
XP_062181394
LinkDB
All DBs
Position
11:1098370..1104295
Genome browser
AA seq
1303 aa
AA seq
DB search
MAIVRSGDGVRLPRLDGGGGEGSPEATEDEDEEASRATLSQESEADGFSGGEEEGDEEEN
GGEGEGREEAEEEESEQEEEDSGMGSDELEVTELGEAGAEMCQVRDQSVAVPLELYNLGR
LGDVLSLDAWNNLLSEEERLRLAALMPDMDQETFARTLVELLAGENFHFGSPLAALFDRL
KGGLCDPRVVLYRRGTCFAERRKHYYWLQSYHNSMVRGLWEIKDCWKGREGYSLDERLRV
LDAMKVQRQQKIALGLAGRAASETDSESRESGEQFVTRLKPDKMGLKKAGKSVKERSRGL
LRVGVRKGVDEEYIGGSGRDAAVTLSELSRQHNAYVYDPSVTHRGKLHRSIDGLCAEDLG
YDRDLPRIRPSRPLTKPGKKKDLAKSYDGYLHGNNYSDSHTSSPYYYGRPVANQGVTLAA
AFDPPYFDTGRNARHSERDWVQGGKMVQSKPLIGDATHWSAGTHTGNLDDWQKGQSTADY
RSRNAQAVHGMKVKPYKNIVQQVNDAHLGSDPRGKISQVKIKGKSSSQFHRISQKHSKSD
AVYAQNEESESDSSEQFEDGGDVKFLERKPERHHSGFHRPAHGAKKSHNLAKTIKMNYPA
STADLEPSQSKGVKGKVSETGYLSDVHVTMPEQISEVIKPQAASGERKRKGTANLDMHGY
DDFELYEIKENANESFMSPENESLASRSGHAAQDSNGDFGGNGRVKVPLSSCSSGSKKLK
GRVEVTSLDEHGETAPSGPKVVENSGSSKKKSKKKPETITDAVTVAEPALAIPENVVAIE
PEKPPEKPKKKYVPITPTIHTGFSFSVVHLLTAVKKAMVSPTEDTPATAKQPDGEGGKKW
FNNEENGKTPQESSATEQAQQVLEAADASAAEPTVPSNSTALTVQELVNRIRSNPGDPRI
LETQEPLQDLVRGVLKVLSSRVAPLGAKGWKVLVAYEKSNKSWFWVGPVPSVSSDGDPDE
ETSAEAWGIPHKMLVKLVDAFANWLKSGQETLKQIGSLPPPPPPNPANLDLKERFKELRA
QKSLNTIIPSSDEARVYFQREEFLRYSIPDRAFCYTAADGEKSIVAPLRRGGGKPTAKAR
GHPMLLPDRPPHVTILCLVRDAAARLPAGTGTRADVCTLLRDSQYLNFEEANKEAAINQV
VSGALDRLHYERDPCVLYDNDKKLWTYLHRGREEEDFEDDGTSSTKKWKRPRKDPSDPAE
PGVANDDFEDDGTGTPSTNNVKKQKTDHAYPTVSGEAKDGGDHATKNSSAGGFSGGLEGD
PDINVVPPSKNDEETGGVVYTDAITDVGGSKHSVDTTPGSGAE
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgtgaggagcggcgatggcgtcaggctcccgaggcttgacggcggcggcggg
gagggctcgccggaggccacggaggacgaggacgaggaggcgtcgcgagccacgctgtct
caggagtccgaggctgatggcttctcaggcggcgaggaggagggagacgaggaggagaac
ggaggcgaaggtgaggggcgagaggaggcggaagaggaggaatccgagcaggaggaggag
gactcggggatggggtcggacgagctggaggtcacggagctcggggaggcgggggcggag
atgtgccaggtcagggaccagagcgtcgccgtgcctctggagctatacaaccttggccgc
ctgggcgatgtgctctcgctcgacgcgtggaacaacctcctcagcgaggaggagcggcta
cgactcgctgccttgatgccagacatggaccaggagacatttgcacgcaccctcgtcgag
ctcctcgcgggggagaatttccacttcggaagcccccttgctgccctcttcgacaggctg
aaaggtggactctgtgaccccagggtcgttctgtaccgccgtggcacctgctttgcggag
cggcgcaagcattactactggctgcagagctaccacaattccatggtgcgagggctgtgg
gagatcaaggactgctggaagggccgtgagggatacagccttgatgagaggctgagggtg
ctggatgcgatgaaggttcagcggcagcagaaaatagctctgggtttggctgggcgggct
gcatcagagactgattcggagagcagggagtctggggagcagttcgtaacacggctgaag
ccagataagatgggactgaagaaggctggaaagtcagtgaaggaaaggtctagggggcta
ctgcgcgtgggtgtgcgaaaaggagtggatgaggagtacattggagggtctggccgcgat
gctgcagtgacactctctgagctttctcgtcaacataatgcttatgtctatgatccaagt
gtcacacatagagggaagcttcacaggagcatagatggcctttgtgcggaggatctagga
tatgacagagatttgccaagaattcggccttcgaggccgctgacgaagccagggaagaag
aaggatttggctaagagctacgatggatatcttcatggaaacaactacagcgatagccat
accagttctccttattactatggcagacctgttgctaatcagggagttaccttggcagca
gcatttgatcctccgtattttgacactggaaggaatgcaaggcactcagagagagactgg
gtacaaggtggaaaaatggtgcagagtaaacctctaataggggatgcgacacactggtca
gctggtacccacactggtaacttagatgactggcagaaagggcagtctacagctgattac
aggagcagaaatgctcaagctgttcatggtatgaaagttaagccctataaaaatattgtg
caacaggttaatgatgctcaccttgggtctgaccctagagggaagatatcacaggtgaag
attaaaggtaaatccagtagtcaatttcataggattagccagaagcactccaagagtgat
gctgtctatgctcaaaatgaggagtcagaatctgattcatcagaacagtttgaagatggt
ggggacgtgaaatttctcgaacggaagccagagcgtcaccattctgggtttcatagacca
gcacatggtgccaaaaagtcacacaatcttgccaaaacgatcaaaatgaattatcctgct
tctactgcagatttagaaccctctcagagcaaaggagtcaaaggaaaggtttcagagact
ggttatttaagtgatgtgcatgtgacaatgccggagcagattagtgaagtcattaaacct
caagcagcaagtggtgaaaggaagcggaaagggacagcaaatttggacatgcatggttat
gatgactttgagttgtatgaaatcaaagaaaacgccaatgagtcattcatgtcaccggaa
aatgaaagtcttgccagcagatcaggtcatgcggcccaagattctaatggtgattttggt
ggtaacggaagagtaaaggtgccactgtcaagttgcagctctgggtccaaaaaactaaaa
ggaagagttgaagttactagcctggatgagcatggtgagaccgcgccatctggtccaaag
gtggttgagaacagtggtagctcgaagaagaaaagtaaaaagaagccagagaccattaca
gatgcagttactgtagcagaaccagctcttgccataccagaaaatgtggtagcaatagag
cctgagaagccgcccgagaagcccaagaagaagtatgtaccaattacaccaactattcat
accggattttcattctctgttgtacatctcttaactgctgtaaagaaggctatggtcagt
cctacggaggatactccagcaacagcgaagcaacctgatggagaggggggcaaaaaatgg
ttcaacaatgaagagaatggcaaaacacctcaagaatcaagtgcgacagagcaggctcaa
caggttcttgaagctgcagatgccagtgctgcagagccgactgttccgagcaattcaaca
gcgctcactgttcaagaacttgtcaaccgaattagatcaaatcctggagatcctaggata
cttgaaacgcaggagccccttcaggatttagttcgaggagtattgaaggtactgtcatct
agagtagctcctctaggtgcgaagggctggaaagtgctagttgcctacgaaaaatcaaac
aaaagttggttctgggttggtccagtgccttctgtttcttcagatggcgatcctgatgaa
gaaacttctgctgaagcatggggtataccgcacaagatgcttgtgaagttggttgatgca
tttgcaaattggctgaaaagtggtcaggaaacccttaagcaaataggatcccttccacca
cctccaccaccaaatcctgcaaacttggatttgaaggaaagattcaaggagcttagagca
cagaaaagtctgaacacaataatcccaagctcagacgaagcaagggtatatttccagcgt
gaggaatttttgagatactcaatacctgacagagccttttgctatactgctgctgatggg
gagaagtctatagttgctcccttgagaagaggaggtggaaagcccacagcaaaagctagg
ggacatcccatgctcttacctgatcgtccgccacatgtcactatcctctgtcttgtaaga
gatgctgctgctaggttgcctgcaggaactggaacaagagctgatgtctgcacactactc
agagattcacaatacctaaactttgaagaagccaataaagaggctgctattaatcaagtc
gtcagtggcgctcttgaccgcttgcactatgaacgcgatccttgtgtactgtatgataac
gacaaaaaattgtggacatatctgcacaggggtagagaggaggaagattttgaggatgat
ggcacatcatctacaaaaaaatggaagagaccgaggaaagatccctctgatcctgcagag
ccaggtgtggcaaacgatgattttgaggatgatggcactgggaccccttcgacgaacaat
gtgaaaaaacaaaagacagaccatgcatatcctacagtgtcaggagaagctaaggatggg
ggagatcatgcaactaagaattcatctgctggtggattttctggtggccttgaaggtgat
cctgatattaatgttgttccaccatcaaaaaatgacgaagaaactggtggagttgtttat
actgatgcaataacagatgttggtggctccaaacattcagtcgacacaacaccaggcagc
ggggctgaataa
DBGET
integrated database retrieval system
