Phragmites australis (common reed): 133885764
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Entry
133885764 CDS
T10575
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
paua Phragmites australis (common reed)
Pathway
paua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133885764
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133885764
Ion channels [BR:
paua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133885764
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133885764
NCBI-ProteinID:
XP_062181493
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Position
11:29557146..29560699
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AA seq
684 aa
AA seq
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MSNDLSTRSSPSSSSASPYDDARRRDQEATATQASGVHGKSRRRRGRGRRAPWSLGLGAT
WALDPRARWVREWNRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDAWLAAAVTALRCA
VDAMHAWNFATQLRCAARSAARNKRGDVADDEEQQAAAEEEGAEPAARKLPVDGRSRKGM
VVDFFVILPVMQVAVWVAAPAMIRAGSTTSVMTVLLVAFLLEYLPKIYHAARFLRRMQGQ
SGYVFGTIWWGIVLNLMAYFVAAHAVGACWYLLGVQRATKCLKEQCHQLPGCASSAVACA
APLYYGGAAAAPVGGDRLVWSQNAQARGVCLSSGDNYQYGAYKWTVMLVGNPSRLERMLL
PIFWGLMTLSTFGNLESTTEWLEIVFNIITITGGLILVTMLIGNIKVFWNATTSKKQAMH
TRLRSVEWWMKRKNLPQSFRHRVRQFERQRWAATRGVDETQIVRDLPEGLRRDIKYHLCL
DLVRQVPLFQHMDDLVLENICDRVKSLIFPKGETIVREGDPVQRMLFIVRGHLQCSQVLR
NGATSCCMLGPGNFSGDELLSWCLRRPFHERLPASSATLVTLESTEAFGLDAGDLKYVTQ
HFRYTFTNDKVRRSARYYSPGWRTWAAVAVQLAWRRYKHRKTLASLSFIRPRRPLSRCSS
LGEEKLRLYTAILTSPKPNQDDDF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgatctctccacgcgctcgtcgccttcctcgtcctcggcatccccttacgat
gacgcgcggaggagggaccaagaagcgacggcgacccaagccagcggcgtccacggcaag
agccggcgccggagggggcgggggcggcgcgcgccgtggagcctcggactgggcgcgacg
tgggcgctggacccgcgggcgaggtgggtccgggagtggaaccgcgcctacctccttgcc
tgcgcggcgggcctcatggtggacccgctcttcctgtacgccgtgtccgtgagcggaccg
ctcatgtgcgtcttcctcgacgcctggctggccgccgcggtcaccgcgctgcgctgcgcg
gtggacgccatgcacgcgtggaacttcgccacgcagctccgctgcgcggcacgctccgca
gcgcggaataagcgcggggacgtcgcggacgacgaggagcagcaggcggccgcggaggag
gagggcgccgagcccgccgcacgcaagctcccggtggacgggaggtccaggaaagggatg
gtagtggacttcttcgtcatcctccccgtgatgcaggtggcggtgtgggtggcggcgccg
gcgatgatccgcgcggggtcgacgacgtcggtgatgacggtgctgctggtggcgttcctg
ctcgagtacctgcccaagatctaccacgcggcgcgcttcctccgccggatgcagggccag
tccggctacgtcttcggcaccatctggtggggcatcgtgctcaacctcatggcctacttc
gtcgccgcccatgctgtgggcgcgtgctggtacctgctcggcgtccagagggccaccaag
tgcctcaaagagcagtgccaccagctgcccgggtgcgcgtccagtgcggtggcctgcgcc
gccccgttgtactacggtggcgctgccgcggcgcccgtcggtggcgacaggctcgtctgg
tcccagaacgcgcaggccaggggcgtgtgcctctccagcggcgacaactaccagtacggg
gcgtacaagtggaccgtcatgctcgtgggcaacccgagccggctggagcggatgctgctc
cccatcttctggggcctcatgacgctcagcactttcgggaatctggagagcacgacggag
tggctggagatcgtgttcaacatcatcaccatcacgggcgggctgatcctcgtcacgatg
ctcatcggcaacatcaaggtgttttggaacgcgacgacgtccaagaagcaggcgatgcac
acgcggctgcggagcgtggagtggtggatgaagcgcaagaacctgccgcagagcttccgg
caccgggtgcggcagttcgagcggcagcggtgggcggccacgcgcggcgtcgacgagacc
cagatcgtgcgcgacctccccgagggcctccgccgggacatcaagtaccacctctgcctc
gacctcgtccgccaggtgccgctcttccagcacatggacgacctcgtcctcgagaacatc
tgcgacagggtcaagtcgctcatcttccctaagggagaaaccatcgtgagggagggggac
ccggtgcagaggatgctgttcatcgtgcgggggcacctgcagtgcagccaggtgttgcgg
aacggcgcgacgagctgttgcatgctgggtccgggcaacttcagcggcgacgagctgctg
tcgtggtgcctgcgcaggccgttccatgagcggctgccggcgtcgtctgcgacgctggtg
acgctggagagcacggaggcattcgggctggacgcgggcgacctcaagtacgtgacacag
cacttccggtacacgttcaccaacgacaaggtgcgccgcagcgcgcgctactactcgccc
gggtggcgcacctgggcggccgtcgcggtgcagctcgcgtggcgccggtacaagcaccgc
aagacgctcgcgtcgctctccttcatccgtccgcgacggccgctgtcacggtgctcgtct
ctcggggaggagaagctccggctgtacaccgccatcctcacctcgcccaagcccaaccag
gacgacgacttctaa
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