Phragmites australis (common reed): 133885828
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Entry
133885828 CDS
T10575
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133885828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133885828
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
133885828
Complex B
133885828
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Paralog
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Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_YTH1
xRRM
Motif
Other DBs
NCBI-GeneID:
133885828
NCBI-ProteinID:
XP_062181564
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All DBs
Position
11:3379211..3382491
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AA seq
249 aa
AA seq
DB search
MSGEAAVGGAEANGVPPNVTIYINNLNEKIKLEELKKSLNAVFSQFGKILDVLAFKTLKH
KGQAWVVFEDVASATEALKRMQDFPFYDKPMRIQYAKTKSDIVAKADGTFVPRERRKRIE
EKHEKKQKREQHHDVSQVGLGINAYPGVYGAPQLTQIPFAGGQKVMMPEIIVPNNILFVQ
NLPQETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQGTAAMNALQGFKITKDN
QMLITYAKK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggcggcggttggcggtgcggaggcgaacggcgtcccgccgaacgtgacc
atctacatcaacaacctcaacgagaagatcaagctcgaagaacttaagaagtccctcaac
gccgttttttcccagttcgggaagattcttgatgtgcttgctttcaagactttaaagcat
aaaggccaagcatgggttgtcttcgaagatgttgcatcagcaactgaggctctaaagagg
atgcaagattttcccttctatgacaaacctatgagaattcaatatgccaagacaaagtcg
gatattgtagcaaaagccgatggaacctttgtacctcgagaaagaaggaagaggatcgag
gaaaaacatgaaaagaagcagaagcgtgagcagcaccatgatgttagtcaagttggcttg
ggcataaatgcttaccctggtgtttatggggctcctcagctcactcagataccttttgct
ggaggacagaaggtcatgatgccagagattattgtgccaaacaacatcctatttgtccaa
aatctgccacaagagacgacccccatgatgctgcagatgctcttctgccagtaccctggt
ttcaaggaagttaggatggtcgaggcaaagcctggaatcgcttttgtggagtatggagac
gaggggcagggcactgctgccatgaatgctcttcaaggctttaagattacaaaagataac
cagatgcttatcacatacgcgaagaagtaa
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