Phragmites australis (common reed): 133885890
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Entry
133885890 CDS
T10575
Name
(RefSeq) SAGA-associated factor 11-like isoform X1
KO
K11363
SAGA-associated factor 11
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133885890
03036 Chromosome and associated proteins [BR:
paua03036
]
133885890
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133885890
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133885890
SLIK complex
133885890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
133885890
NCBI-ProteinID:
XP_062181639
LinkDB
All DBs
Position
11:17840517..17844516
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AA seq
190 aa
AA seq
DB search
MSSSKDAPLSPRSQLALSCFEELLDCAVADVASECHRIARLGLDRSVDTEEEELCVWAER
AAAAAAGDLHPGSGSGGGGEEGGGSKGGVDVFGQTHPAIAADVVECMNCGRHVVAGRFAP
HLEKCMGKGRKARTKTTRSSTAARTRNCNGSTASSYSPYSIAVNSNRASVSNGVPDCGGG
TGGDHSNHAP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccaaagacgcccccttgagccctcgatcccagctggcgctgagctgcttc
gaggagctcctggactgtgcagtggcggacgtggcgtcggagtgccaccgcatcgcgcgc
ctcggcctggaccgcagcgtcgacaccgaggaagaggagctctgcgtctgggccgagcgc
gcagccgccgccgccgccggagacctccaccctgggtccgggtccggcgggggtggcgag
gagggcggcgggagcaagggcggggttgacgtgtttggtcagacgcaccccgccatcgcc
gccgacgtcgtcgagtgcatgaactgcggccgccatgtcgtcgcaggccgcttcgcgccg
cacctcgagaagtgcatgggcaagggccgcaaagctcgaacgaaaaccacaagaagcagt
acagctgcacggaccagaaactgcaatggaagcacagcttcttcatactctccatactcc
atcgcggtgaacagtaacagggcgagcgtttctaatggcgtgcctgattgcggcggtggc
acaggaggggatcacagcaaccatgcaccgtag
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