Phragmites australis (common reed): 133886111
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Entry
133886111 CDS
T10575
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133886111
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133886111
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD_LRWD1
NBCH_WD40
Rrn6_beta-prop
MIOS_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
133886111
NCBI-ProteinID:
XP_062181825
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Position
12:complement(1445334..1451069)
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AA seq
482 aa
AA seq
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MGRFKRAKKAKSKKTKKAESSSSSNPAVAPGPAKVWQPGVDALEDGKELQFDPEAYNYLR
GFSIGWPCLSFDVMRDQLGLVRSEFPHTLYGVAGTQAEKASCNYIGIFKFSNIKGKKREP
VPASAADGDSDMDNDSSSDEEDEETSEHTKPVVHLKKAAHAGCVNRIRSMTQNPHLCATW
GDTGHVQVWDLSLFRNSLAESGAAAHKEEDIINKLSPVKVFSGHKDEGYAIDWSPLVTGR
LVSGDCNKCIHLWEPTSNNWNVDANPFVGHSASVEDLQWSPTEADTFASCSVDGTISIWD
IRTGKKPCISVKAHNADVNVISWNRLFSCMIASGCDDGSFSIRDLRLIRRDSLIAHVEYH
KKAITSIEWSPHEVSTLAVTSEDHQLTIWDLALEKGKEEEAEFRAKMKEQANAPEDLPPR
LLFVHQGQKNLKELHWHPQIPAMIVSTAANGFNVLMPSNIDTTIPAAEPGNTDATIPSSA
EP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcttcaagagggccaagaaggccaaatccaagaagaccaagaaagctgaatcc
tcgtcgtcatctaatcctgctgttgcgcctggcccggctaaggtatggcaaccgggtgta
gatgcactggaagatgggaaggagctccagttcgatcctgaggcctacaattatctccga
ggatttagcattggctggccttgcttgagttttgatgttatgcgcgatcaacttggactt
gtccgatcagagttcccacatacattgtatggtgttgctggaacgcaagctgagaaggct
tcgtgcaattatattggcattttcaagttttccaacataaaagggaagaagcgggaacct
gtaccagcttcagcagctgatggtgacagtgatatggataatgacagcagcagtgatgaa
gaagatgaagaaactagtgaacatacaaagcctgttgtacatctaaaaaaggcggctcac
gcggggtgtgtaaatcggatacgctcaatgactcaaaacccacatctatgtgctacctgg
ggagatactggtcatgttcaggtgtgggacttgagcttatttcgtaattcattagctgag
tcaggggcagctgcacacaaagaagaagacataatcaacaagctctcgcctgtgaaagta
tttagtggtcataaagatgagggctatgcaattgattggagtccacttgttactggaaga
cttgtttctggtgactgcaataagtgcattcacctatgggagccaacttcaaacaactgg
aacgtagatgcaaatccatttgttggacactctgcaagtgttgaagatctacagtggagt
cccacggaagccgacacatttgcctcctgttcagtggatggtacgatatcgatatgggat
atacgtacagggaagaaaccatgtatttctgttaaggctcacaacgctgatgtgaatgtt
atctcatggaataggctttttagctgcatgatagcttcaggatgtgatgatggcagtttt
tcaattcgtgatcttagattaatccggagggactccttgatagcacatgttgagtaccac
aagaaggcaattacatctatcgagtggagtccacatgaagtatcaacactggctgtaaca
tctgaagatcatcaactcacaatttgggatcttgcattggaaaaaggtaaagaggaggag
gccgaattcagagcgaagatgaaagagcaggcaaatgcacctgaagatttgcccccacga
cttctgtttgttcatcagggccagaaaaatctgaaagaattgcactggcacccacagata
cctgcgatgatcgtatcaacggcagctaacggcttcaatgtgttgatgcctagcaacatt
gatacaaccattccagctgctgagcctggcaacactgatgcaaccattccatcatctgct
gagccatag
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