Phragmites australis (common reed): 133886124
Help
Entry
133886124 CDS
T10575
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133886124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133886124
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
133886124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
HEAT
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
HEAT_2
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
DUF4042
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
133886124
NCBI-ProteinID:
XP_062181841
LinkDB
All DBs
Position
12:complement(656831..668984)
Genome browser
AA seq
1355 aa
AA seq
DB search
MALGDLMASRLVHSPSQSPAAPSAPLPNHHHSHVTDGPPAVNGPEHRNGLEADEEKPAPV
AYLPQVVVLCEQRHEALNEAAAAAAGPSTSGLVSKWRPKDRMKTGCVALVVCLNISVDPP
DVIKISPCARMECWIDPFSMAPTKALESIGKTLHSQYERWQPKARYKLQLDPTVEEVKKL
CNTCRKYARSERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPITDLDSWLKTPSIYV
FDCSAAGIIVKAFLERLDWSSSSSASSLKDCILLAACEAHQTLPQSAEFPADVFTACLTT
PIKMALHWFCKRSLLRGSLDHSLIVQIPGRQNDRKTLLGELNWIFTAITDTIAWNVLPHD
LFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISFPLLPPTHQHHMWDAWDMAAEICLS
KLPQLIADPNAEFQPSPFFTEQLTAFEVWLDHGSEEKKPPEQLPIVLQVLLSQSHRFRAL
VLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKSCQVDLV
KDGGHAYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRKGQEACINAGLIDVCLRHLQPEN
PHDAQSEPLLLQWLCLCLGKLWEDFPEAQLLGLQSNAPEIVIYLLSEPQPEVRASAVFAL
GNLLDMGSSSLNGADDDSDDDEKVKGEINVVRSLLQVSSDGSPLVRSEVAIALTRFALGH
NKHLKSIAAEYWKPQTNSLLKSLPSLANISNPSNVYSSNSILQGSSGLTSHIGPVLRVGS
DSSATGRDGRISTSSPIATTSIMHGSPQSDDSSQHSDSGILLRENASNGGLSSTRSKPVS
GIYSQFISTMCSVAKDPYPRIATIGRRALSLIGVEQVVMKHTRFNSGGAHQGETSAPPSN
FGMARSSSWFDMNSGNFSMAFRTPPVSPPQHDYLTGLRRVCSMEFRPHLMNSPEGLADPL
LSSAAAPSNAELSILPQSTIYNWSCGHFSRPLLTGSDDNEDAKARREERERLALDCIAKC
QHSSACKMTSQIASWDTRFELGTKAALLMPFSPIVVAADENEQIRVWNYDDALPVNSFEN
HKWSDRGLSKLLLINELDESLLLAASSDGNVRIWKNFTQKGGQKLVTAFSSVQGHRAAGC
SIVIDWQPQSGYLYASGDMSAILVWDLDKEQLLSTIQASADSAISAMSASQVRSGHFAAG
FADASVRIFDVRTPDRLVYMARPHAPRTEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVR
RAAEPYLTIEAHRGSLTALAVHRHAPVVASGSAKQMIKVFSLEGEQLTIIRYQPSFMGQR
IGSVNCLSFHPYKSLLAAGAGDNALVSIYAEENYK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatctcatggcgtccaggctcgtgcactcgccgtcgcagtcgccggcc
gcgccctcggcgccgctgccgaatcaccaccacagccacgtcacggatggcccccctgcc
gtgaatggaccagagcacagaaatgggctagaggccgatgaggagaagccggcgccggtg
gcgtacctgccccaggtggtggtgctgtgcgagcagcgccacgaggcgctcaacgaggct
gcggctgcggcggccgggccctccaccagcgggctcgtctccaagtggcggccaaaggac
cggatgaagaccggatgtgttgctcttgtagtatgtttaaatattagtgttgatccacca
gatgtaattaaaatttccccttgtgcaagaatggagtgctggatagatccattttctatg
gcacctacaaaagccctcgaaagcattggaaaaacattgcactcacagtacgaacgatgg
caacctaaggctcgttacaagcttcagctggatccaacagtggaggaagttaagaagctt
tgtaatacttgccgcaaatatgccagatcagagagagtccttttccattataatggtcat
ggtgtaccaaaacctacagctaatggtgagatttgggtgtttaacaagagttacacccag
tatattccacttcctattactgatcttgattcatggctaaaaacaccttcaatctatgtc
tttgactgctcagcggctggaattattgttaaagcttttctagagcgcctagactggagt
tctagcagctctgcatcttcactgaaggattgtattcttcttgctgcctgtgaggcacat
caaactcttccccagagtgcagaatttccggctgatgtgtttacagcttgccttacaaca
cccatcaaaatggcattgcactggttttgtaagcgatcattacttcgtggttctctggat
cattctcttattgtccaaattcctggaaggcaaaatgaccgtaaaactcttcttggggag
ctgaattggattttcactgctattacagatactattgcatggaatgttcttcctcatgat
ctattccaaaggcttttcaggcaagatcttctggttgctagtctttttcgcaacttctta
cttgctgagagaatcatgcgatctgcaaattgttctccaatttctttcccgttgttacca
ccaacacatcaacaccatatgtgggatgcatgggacatggctgctgagatctgcctttcc
aagcttcctcaattaattgctgatccaaatgcagagtttcagccaagcccattttttacg
gaacaattgacggcttttgaagtatggcttgatcatggctctgaggagaagaaaccccct
gaacagttacctatagttcttcaggtcctgcttagtcaatcacacagattcagagcactt
gttctgcttggaagatttcttgacatgggaccatgggcagttgatttggccttgtctgtc
ggaatcttcccttatgtactcaaactgcttcaaacaagtgcaatggagttgcgtcaaatt
cttgtgttcatatggacaaaaattctctctcttgataagtcgtgccaggttgacttggtt
aaagatggagggcatgcatattttatcaggtttctggacagtttggatgcctacccagag
cagcgtgcaatggccgctttcgtcttagcagttattgttgatgggcatagaaagggtcaa
gaggcttgtatcaatgcaggtcttatagatgtttgcctgagacatcttcaacctgagaat
cctcatgatgcacagtcagagcctttgcttttgcagtggctttgtttatgcctcggcaaa
ctctgggaagatttccctgaggctcagttacttggtctgcaatcaaatgcgccagaaatt
gttatctatctattgtcagagcctcaacctgaggtcagggcttctgctgtttttgcactt
ggtaatctcctagatatgggatcttcgtcattaaatggagctgatgacgattctgatgat
gatgaaaaggtgaaaggtgaaataaatgttgttcgaagccttctgcaggtctcttcagat
ggtagcccccttgttagatctgaggttgctatagcgcttacccgctttgcgttgggccac
aacaaacatctcaaatctattgctgctgagtattggaaacctcaaaccaattcattgctg
aagtcactaccatcattggctaatataagcaatccaagcaatgtttatagttccaacagc
attctacaaggcagcagtggccttacttcgcatattggtcctgtgctaagggtcggcagt
gatagcagtgccactggccgtgatggaagaatttctacaagcagcccaattgcgacaacg
agcatcatgcatggctctccccagtcagatgattcttcccagcactctgattcaggaata
ttactgagagagaatgcaagtaatggtggtcttagctccaccaggtcaaagcctgttagt
ggaatttattctcaatttatatcgactatgtgctctgttgctaaagatccttacccaaga
atagcaactattggtcggagagcactatccctcataggtgttgaacaagtggtcatgaaa
catactagatttaacagtggaggtgcacatcaaggagagacatctgcacctccatcaaac
tttggaatggcacgctcttcttcctggtttgatatgaattctggaaacttctcaatggca
tttaggacccctcctgttagccctcctcagcatgattatcttacaggattacgccgagtg
tgttctatggagttcagaccacatcttatgaattcacctgagggcttagctgatcccctt
ttaagctctgctgcagctcccagtaatgctgaactaagtatacttccccaatcaacaatt
tacaactggagttgtggtcacttctctaggccactgttaactggttctgatgataacgag
gatgcaaaagctagaagagaagagagagaacgacttgcactggattgcattgctaaatgc
cagcattcctcagcttgcaagatgaccagccaaattgctagctgggatacgaggttcgag
ttgggtacaaaagcagcattattaatgccattttctccgatcgtcgttgcagctgatgaa
aatgagcaaataagagtgtggaactatgatgatgcgctaccggtgaacagttttgaaaac
cataagtggtctgacagagggctatctaagcttttgcttatcaatgaacttgatgagagc
ttgcttttagctgcctcgagtgatggaaatgtccgtatatggaaaaactttactcaaaag
ggaggacagaaacttgtaactgctttctcatcagttcagggtcatcgagctgctggttgc
agtattgtgatcgattggcagccgcaatctggttatctgtacgcatctggtgacatgtct
gccatccttgtatgggatcttgacaaggaacaacttctcagcaccattcaagcatctgcc
gatagcgccatttctgctatgtctgcatctcaggtccgctctggtcattttgctgctggt
tttgctgatgcttctgtcaggatatttgatgttcgcactcctgataggctcgtctatatg
gccaggccacatgccccaagaacagaaaaagttgtgggcataggatttcagcctgggttt
gatccatacaagattgtaagcgcatctcaagctggagacattcaatttctggatgttaga
agggcagcagaaccctatctcactattgaggcacacaggggctcgcttacagcattagct
gttcatcggcatgccccagttgttgcaagcggctcagccaagcagatgattaaagtgttc
agtctcgaaggagaacagttgacgataatacggtaccagccatcttttatgggccaaaga
ataggcagtgtaaattgcctttcttttcacccatacaaatcactcttagccgcaggtgcc
ggtgataatgctcttgtctctatctatgcggaggaaaattacaagtaa
DBGET
integrated database retrieval system
