Phragmites australis (common reed): 133886595
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Entry
133886595 CDS
T10575
Name
(RefSeq) splicing factor U2af large subunit B-like
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
Spliceosome [BR:
paua03041
]
Complex A
U2 snRNP components
U2 related factors
133886595
Complex B
133886595
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NCBI-GeneID:
133886595
NCBI-ProteinID:
XP_062182285
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Position
12:31682024..31687207
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AA seq
536 aa
AA seq
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MADDPSAGVGGGDADRIEGDTHPRDDGLSKSKDREKDKDRDRRRDRDRDRGRDKDRDRDR
DRDRDRDRDRHSRHHRERKEHRDRPDVHDHHRGRDSERRRDRERDEPRRHRSHSQSRSRG
RDRRSRSRSRSRSKRVSGFDAPPLQAMASTFPVIPTPSQLPGSSIPGMFPNMLPFGVGVG
GQFNPLVMQPQAMTQQATRHARRVYVGGLPPSANEQSVAIYFNQVMAAIGGNTAGPGDAV
LNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPS
PNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG
NSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQV
QLQKLVYQVGALPTKVVCLTQVVSADELNDDEEYEDIMEDMRLEAGKYGNLVKVVIPRPD
PSGQPVAGVGKVFLEYADIDGAAKAKAALHGRKFGGNPVVAVCYPEDKFANEEYDG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaccccagcgccggcgtcggcggcggagatgcggaccgcatcgagggcgac
acacatccacgtgatgatgggttgtcaaaatccaaggatagagaaaaagacaaagatagg
gatcgtcgcagggaccgtgacagagatcgaggaagagacaaggatcgggatagggacagg
gatcgggacagagatagggatcgggatcgccacagtaggcatcaccgtgaaagaaaggaa
cacagggaccgtcctgatgttcatgatcatcacagaggccgcgattctgaaaggagaaga
gaccgtgaaagagatgagcctcggaggcatcgttctcactcacagtctcgttcaaggggc
agggatcgcagatctaggtctcgctctcgttcaagaagcaagcgagttagtggatttgat
gcgccacccctgcaagccatggcttctacattccctgttattccaacccctagtcagtta
ccgggctcttctattcctggcatgtttccgaacatgctcccttttggtgttggtgttggt
ggacagttcaatccccttgtcatgcagccacaagcaatgacgcaacaggctactcgtcat
gctcggcgtgtttatgtcggtggccttcctccaagtgccaacgaacagtcagttgcaata
tactttaatcaagtcatggctgctattggaggaaatactgctggtccaggtgatgctgtt
cttaatgtctacataaaccatgacaagaaatttgcttttgtggaaatgagatctgttgag
gaagcaagcaatgcaatggccctggatggcattttgtttgaaggggctccagtgaaggtt
agaaggccaaccgactataacccttccctggcagctgccctgggcccaagccagccaagc
cccaatctgaatcttgctgctgttggcctaactccaggatctgctggaggcttagaaggt
ccagatcgtatttttgtgggcggccttccctattacttcacagaagctcaagttcgggag
ttgcttgaatcctttggacctcttcgaggatttgatcttgtgaaggatagggaaaccggt
aactcaaagggctatgcattctgtgtctaccaggaccttagtgtcactgacattgcctgt
gctgctctaaatggtatcaagatgggagacaaaacccttactgtcagacgagcaaaccag
ggagcatcgcagcccagaccagagcaggaaagtatcctattgcaggcacagcaacaggtg
cagttacagaaacttgtgtatcaagttggagcgctccctacgaaggttgtttgcctcacc
caggtggtaagtgcagatgaattgaatgatgatgaagagtacgaggacattatggaagac
atgaggctagaagcaggcaaatacggtaatttggtgaaagttgtgatcccacgtcctgac
cccagtggacagccagtcgcaggagttggaaaggtgttcctggaatatgcagacatcgac
ggcgccgccaaagcaaaggcagcattgcatggaaggaaatttggtgggaacccagtggtt
gcggtctgctatcccgaggacaagtttgccaatgaggaatacgatggataa
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