Phragmites australis (common reed): 133886699
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Entry
133886699 CDS
T10575
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133886699
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133886699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
Cnd1
HEAT_2
REC102
Motif
Other DBs
NCBI-GeneID:
133886699
NCBI-ProteinID:
XP_062182470
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Position
12:complement(30143198..30154170)
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AA seq
1103 aa
AA seq
DB search
MEDTLATLRRPKRGRPPRPREADHAEFEEEAEAEGLAPPQSKRKRAASAAAAAALEDQPL
IEIIKHNGRLISHAVKKLVEDYESKKKSVTFQILTMLFEACGAKHEIYPDYLHESDVDEV
VFSLVQLARKGLVEDNYNSKQKDLKTFKENLVFFWDNFVLECQNGPLFDNILFQKIKDYV
VALSCTPPRVYRQVASLVGLQLVTSFISVAKTLSGQRETTQRQLNAEKKKQSDGPLVESL
NKRLALTHENITYLEELMRKIFSGLFMHRYRDVDPEIRMSCIKSLGIWFVSYPSLFLQDI
YLKYLGWTLNDKNAGVRRTSVLALQSLYEVDENIPSLGLFTERFYRRMIQLADDIDISVA
VSAIGLIKQLLRHQLLSDDDLGPLYDLLIDEPPMIRRAIGELVYDHLIAQNIKTSHPGDR
DEENESSEVHIGRMLQILREFSDDPVLSSYVIDDIWDDMKAMKDWRCMVSLLLDENPAME
LTDMDATNLVRMLRASAKKAVGERIVPAMDNRKLYYNKAQKEVLENSKREITTALMTRYP
QLLRKYISDKAKISPLVDMMILLKLEMYSYKRQEKNFKAAIDLIFDAFFKHGEKDTLRSC
IKSITFCCTECQADLKDYAENKLKNLEDELVFKVKNAIKEVEAGDDEYSLLVNLKRLYEL
QLSKPVKNDGLFEDMYRILSYLRDMDNEVKSFLLLNMHLQVAWCLHAIDGETPSETSIDE
LLSKQSSLFDQLYYHLVVLPTYQKEGRSTTVLSCRVCIITAEMWCLFKKSKYSSTRLESL
GYLPQLDIVQKFWKLCEQQLNISDETEDEDANEEYIEDTNRDAVMIAAAKLVLADTVSKD
YLGPEIVSHYVSHGASTTEIIKHLITSLKKNGNFDMASLFFEALRRAYVRYMTHVHDEEN
QTLIEKSYSECQDLGSRLAGSYVGAARNKNKSEILKIIQDGISFAFADLPKQLSFLEAAL
LPFVSKLPSTDIPDILVDVGKRTQDTDMSGDQSAWRPYFMFVEHLRERLAKNEVFQEEKE
EKPVRRRGRPRKVRDVPGKKLFDEHNSSDGESISASDHQGHGEDDTDDDADQPLINTIRS
SASKLRSLKLSQQGAPGPSGSHS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacgctcgccaccctgcgccgcccgaagcgcgggcgcccgccgcggccgcgg
gaggcggaccacgcggaattcgaggaggaggccgaggcggaagggctcgcgccgccccag
tccaagcggaagcgcgcggcctccgccgcggcggcggcggcgctggaggaccagccactc
atcgaaattatcaaacataatggcaggctgattagccatgctgtcaaaaagttggtcgag
gattatgaatcaaagaaaaaatctgtgacatttcaaatattgactatgctgtttgaggct
tgtggcgccaagcatgagatttatccagactaccttcatgagtcggatgtggatgaagtt
gtattctcccttgttcagctagctagaaaaggtctggtggaagataattacaactcaaaa
cagaaggacctaaaaaccttcaaagagaacctggtttttttttgggataactttgtcctt
gagtgtcagaatggcccattgtttgataatatcttattccaaaaaatcaaggattatgta
gttgctttgtcatgtactcctccaagggtgtatcgtcaagtagcctcattagttgggctc
cagcttgtaacatcattcatatctgttgctaagactctcagtggacaacgtgagaccact
caaagacagttgaatgcagagaagaagaagcagagtgatgggccacttgttgaatctctc
aacaaaagattagctcttactcatgaaaacattacttacttggaggaattgatgcggaag
atattcagtgggctattcatgcaccgttatcgtgatgttgatcctgagatccggatgtca
tgtatcaaatctcttggtatttggtttgtttcatatccatcacttttcttgcaagatatt
tatctgaagtatcttgggtggacactgaatgacaagaatgctggagttagaagaacttct
gttctcgccttgcaaagtttgtatgaagtggatgagaacataccatctcttggtctcttt
actgagaggttttacagaaggatgatccagcttgctgatgatattgatatttctgtagca
gtgtcagctataggactcatcaagcaattactgaggcatcaactgttaagtgatgatgat
ttgggtccattgtatgatttgcttattgatgagcctccaatgattaggcgtgccataggg
gaattagtttatgatcacctaatagcacaaaacatcaagacctctcatcccggagataga
gatgaggaaaatgaatcttccgaggttcacattggtcgaatgctgcaaatcctaagggaa
ttttcagatgacccagtcctcagttcttacgtcattgatgatatttgggatgacatgaag
gccatgaaggactggaggtgtatggtctctttgcttctggatgaaaatccagcgatggag
cttactgacatggatgcgacaaacctagttcgtatgctgcgagcctctgcgaagaaggct
gttggggaaagaatagttcctgcaatggacaacagaaagctgtactacaataaagctcaa
aaggaagtactggaaaatagcaagcgtgaaataacaactgccttgatgacgaggtatcca
cagcttttaagaaaatacatatctgacaaagctaagatatcacctctagttgatatgatg
attctattgaaacttgagatgtactcatacaaaagacaagagaagaatttcaaggctgcc
atagatctcatctttgatgccttcttcaaacatggtgagaaggataccctgagatcttgc
atcaagtcaattactttctgttgcaccgagtgccaggctgatcttaaagattatgctgaa
aataaacttaagaatcttgaggacgaattggtttttaaagtaaaaaatgcaatcaaagaa
gttgaggcaggtgatgatgaatactccctcttggttaatttgaagcgactttatgaactt
cagctgtcaaaacctgttaaaaatgatggtttatttgaggacatgtaccgaattcttagt
tatctaagagatatggataatgaggtaaagagctttctcctcctcaacatgcaccttcaa
gtagcatggtgcctgcatgcaattgatggtgaaaccccatctgaaacatctatcgatgaa
cttttatccaagcaaagctctcttttcgatcaactctattatcatttggtggttttgcct
acttaccaaaaagagggaaggagcacaactgtactctcctgcagggtctgcatcattact
gcagagatgtggtgcttgtttaagaagtcaaagtattcttcaacaagattagaaagtttg
ggttatctcccacagttagatattgttcagaagttttggaaactatgtgagcaacagctc
aatatatcagatgaaacagaagatgaagatgcaaacgaagaatatattgaagacacaaac
agggatgctgtcatgattgcagcagcaaagctagtgcttgctgatacagtatcaaaggat
tatcttggcccggagattgtttctcactatgtatctcatggagcaagtacgacagagata
atcaaacatctaattacctcactaaagaaaaatggaaacttcgacatggcttctctgttt
tttgaggcattgagaagggcttatgtacggtacatgacccatgttcatgacgaagaaaac
caaaccctgatagaaaagtcttattcagaatgtcaagatcttggtagccggcttgcaggg
tcctatgttggcgcagcccgtaacaaaaacaagtctgagatcttgaagattatccaagat
ggcatttcttttgcctttgcagaccttccaaagcaattatcgttcctggaggctgctctt
ctgccatttgtttctaaacttccctcgacagatataccagatatcctggtggatgtaggg
aagaggactcaagataccgatatgagtggagatcaaagtgcttggcgtccatattttatg
tttgtagaacacctacgtgaaaggcttgcaaagaatgaggttttccaggaggaaaaggag
gaaaaacctgtaaggcgtaggggccgcccaagaaaggttagagatgtacctgggaagaaa
ctcttcgatgaacacaactctagtgacggagagtctattagtgcttctgaccatcagggt
catggcgaagatgacactgatgacgatgcagatcagcccttgatcaacacgattaggtct
tctgcgtctaagcttagatcactaaagttgtctcaacagggagctcctgggccatcagga
agccatagctga
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