Phragmites australis (common reed): 133886700
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Entry
133886700 CDS
T10575
Name
(RefSeq) two-component response regulator-like APRR3 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133886700
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
DUF5000
Jas_motif
Motif
Other DBs
NCBI-GeneID:
133886700
NCBI-ProteinID:
XP_062182471
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Position
12:2692241..2697246
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AA seq
708 aa
AA seq
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MSPDADAVTASAAGGGGGGEASGASPSPSQSRAAAGRGVVRWDQILPRCSLRVLLVEHDD
STRQVVTALLRKCGYRVAAVADGMKAWQVMRERAYAFDLVLTEVAMPTLSGIQLLARVVA
ADECKNIPVIMMSSQDSISTVLKCMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQIN
ASENNAASNHLSANAADSSKTGENSDEESDGHSFGSKRETEIQSVEKLPEILKDEGAGSS
RKNKIQSESYGGVNTKAHASKGSDGALSGSACNISNLQAFSAETNVRSKCLNGTTSAKFA
EQIMDNALRIADASSRHPSNLGKDLAMTQPTTDRKCKSSVLESIAVTENNLGENSKGAAR
GHAESCPSQFLEINLGKQHCLNGYTNQEFREKDIFNHSNSSAFSRYGNKRIEPSSQQQLF
PSLRIARQEPVYGKDPVLQPNGVLPSHEHNTGESRMQAQIPLDSSMDGAAILCSSRAREK
AGTSSSSHRKDSLSHPSYGFIPLPIPVGAAMPYHYGAILQPLYYPQASHVHCDSAGINKA
AIQHASGKFNYHENHCKLSQVDEHKQLDENQQLHHSRQILRESGEPIHMVGSHVERVNQS
ASCSKDIRKGSGCTGSGETDINTNTVVALESGNESGVQNCSNNGLDSDRSRREAALIKFR
MKRKDRCFEKKVRYHSRKKLAEQRPRVKGQFVSQKLKSTTTTDAETDS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgacgccgacgcggtcacggcctccgccgccggcgggggcggtggcggagag
gcttctggcgcgtcgccgtcgccgtcccagtcccgcgccgccgctggccggggggtggtg
cggtgggaccagatcctcccgcgctgctccctccgggtcctcctcgtcgagcacgacgac
tccacgcgccaggtcgtcaccgcgctcctccgcaagtgcggctaccgcgtggcggcggtg
gcggacgggatgaaggcgtggcaggtcatgcgtgagcgcgcgtacgctttcgacctcgtg
ctcacggaggtcgccatgcccacgctctccggcatccagctgctcgccagggtcgtcgcc
gctgatgagtgcaagaacatccccgtcatcatgatgtcgtcccaagattctatcagcact
gtgcttaagtgcatgcagaagggtgcggtggacttccttgtgaaaccagtgagaaagaat
gagttgcgtaacttatggcaacatgtatggaggcgacatgcaatgaatagccaaataaat
gcatcggaaaataatgcagccagcaatcatttgagtgccaatgctgctgattcgtcaaag
acaggagaaaacagcgatgaggaaagtgatggtcatagctttggtagcaagagggagact
gaaattcagagtgttgaaaaattacctgagatccttaaagatgaaggggcaggctcatcc
agaaaaaataaaatacagagcgagtcttatggtggagtaaacacaaaagcgcatgcctca
aaaggtagtgatggtgctttaagtggaagtgcatgcaacattagtaacttgcaagcgttt
tcagccgagacaaatgtgcgttccaaatgccttaatggtactacatctgcaaagtttgct
gagcaaataatggataatgctttaaggattgctgatgcaagttcacgtcatccaagcaat
cttggcaaagatttggctatgacccaaccaacaactgacagaaaatgcaaatcttcagtg
ttggaaagtattgctgtcacggaaaataaccttggtgaaaactcaaagggtgctgcaaga
ggccatgctgaatcttgcccctcccaatttctggagatcaacttaggaaagcaacactgt
cttaatggttatacaaaccaagagttcagggaaaaagatatctttaatcactcaaattcg
tctgccttttcaagatatggtaataaaaggatagaaccatcatctcagcaacagttgttc
ccttcgctccgcatagctcgtcaagaacctgtttatggaaaggacccagttctccaaccc
aatggggtattgccttcccatgaacataatacaggcgagagtagaatgcaagctcaaatt
cctttggacagtagcatggatggtgctgccatcctgtgttccagtagggcaagagaaaaa
gctggtacaagcagttcctcccatagaaaggacagtttgagccatccttcatatgggttt
atacctcttccaattcctgttggtgctgcgatgccctaccattatggtgcaattctgcaa
ccattatactacccacaggcttctcatgtgcattgtgattcagctggaatcaacaaggca
gcaattcagcatgcctctggtaaatttaattaccatgaaaatcattgtaaactatctcag
gtagatgaacacaaacagttggacgaaaatcagcagttgcatcattcaagacaaattctc
cgagaatcaggagaaccaattcatatggtgggatctcatgtggagcgtgttaaccagagt
gctagctgcagcaaggatatccgtaaaggaagtggatgcactggtagtggtgaaactgac
atcaatacaaatacggtagttgccctagaaagtggcaatgaaagcggtgttcagaactgc
agtaataatggattggatagtgatcgatctcgccgtgaagctgccttgataaagttccgc
atgaaaaggaaggacagatgctttgagaaaaaggttagatatcatagcaggaagaagctc
gcagagcaaagaccaagagttaaggggcagtttgtgagccaaaagctgaaatcaactacg
acaacagatgcagaaactgactcgtga
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