KEGG   Phragmites australis (common reed): 133886758
Entry
133886758         CDS       T10575                                 
Name
(RefSeq) uncharacterized protein LOC133886758
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
paua  Phragmites australis (common reed)
Pathway
paua03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133886758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paua03021]
    133886758
Transcription machinery [BR:paua03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     133886758
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 133886758
NCBI-ProteinID: XP_062182558
LinkDB
Position
12:28542258..28545425
AA seq 426 aa
MADIRSVAPPASASASTKKKHSKKRKAIDVTVDASLTGSSAAAAPVVAYFPSGYDPLATA
DEPPRARLFRHERRPTHVDLVVGSPGGGPDFVGRSYAGEAATPQLCSYALGVLDKASGTL
KVVPIASNKILRLEPHLELQKPAHSQHSEVAPQAGSAVANDEMKIQDLTRVFGTQKDKDM
DNKWRSLNEQRNDPSAYENLDLGNTNTSDSQAPEIVRNIPPYDPTADTSEKAYLFYEIIP
KNIQPHLLEIVGHLESGEFPSKGYGSFVSNRVHKLHELQGEDKERLAWILSYITHLLSLL
VRNGSMSKRHRKDRKENQANHGPATPHAVYRKLLLMFTEPGSSALSTEKNELLINYILVL
SLFADDFRSDPSDICADLKMTRQMLKPYYDQLGCKAVSTGAFKPTFMTLPAPLKFPQEVT
RRRWRR
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggacatccgaagcgtagccccgcccgcctccgcctccgcctccaccaagaagaag
cactccaagaagcgcaaggccatcgacgtcactgtcgacgcctccctcacaggcagttcc
gccgccgcggcccccgtggtcgcctacttcccctccggctacgaccccctcgccactgcc
gacgagcccccgcgtgcgcggctcttccgccatgagaggcgccccacgcacgtcgacctc
gtggtcggtagccccggtggtggccccgacttcgtcggccggagctacgccggcgaagcc
gccacgccgcagctctgcagctacgccctcggcgtcctcgacaaggcttcaggaacgctt
aaggtcgtccccatcgcctccaacaagattttgaggctagagccacatcttgaactgcaa
aaaccagcacattcacagcactctgaagtggcaccgcaagcaggctcagctgtagcaaat
gatgaaatgaagatacaagatcttaccagggtgtttggcacccagaaagacaaggacatg
gataataagtggaggtcattaaatgaacaaagaaatgatccttctgcttatgagaacctt
gaccttggaaatacaaacaccagtgacagccaggcaccagaaattgttcggaacattcca
ccttatgatcctactgcagatacatcagaaaaggcatatcttttttatgagattattcca
aagaatatacagccgcatcttttagaaattgtgggtcatttagaatcaggagaatttcct
tcaaaaggctatgggagttttgtttcaaatcgtgtacacaagttgcatgagcttcagggt
gaagataaggagaggcttgcttggatactgtcctacatcacacatctcctatctttgttg
gtacgaaatggttccatgtccaagcgtcataggaaagacagaaaggaaaaccaggcaaat
catggaccagcgaccccacatgctgtatatcgtaagctgttgctgatgtttacggaacca
gggtctagtgccttgtcgacagagaaaaatgagcttctgatcaattacatcttggtccta
tcgctttttgccgatgacttccgttccgatccttcagatatatgcgcagacttgaaaatg
acccggcagatgcttaaaccatactacgaccagttgggatgcaaagctgtgtcaacaggt
gcttttaagcctactttcatgacacttccagctcctctcaagttcccacaagaagttaca
aggagaaggtggcggcggtag

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