Phragmites australis (common reed): 133886783
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Entry
133886783 CDS
T10575
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133886783
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133886783
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133886783
microRNA pathway
RISC loading complex
133886783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133886783
NCBI-ProteinID:
XP_062182602
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All DBs
Position
12:424072..429123
Genome browser
AA seq
1006 aa
AA seq
DB search
MDYEHGGGARGRGRGRGGGRRGGGYGPRGGGGYGHDGSGEGGGEGGGYNGTRGGGGYHGS
RGGGEGGGYGAGGRGGRGPGGGGGHAYVSSGGRGGNAWATSGRGRGGGPGEYVPVRAPAQ
ATTARGIATEDAASSSGSVERIVSSDLARVEPLASPPVATSPVATRVAMRRPDGGGSSFQ
AKVRLLVNHFIVNYREASTIFHYDINIKLDQASPKTSSKELSKAEFLSAKDELFKDNSFR
LLSSYVAYDGGRNLFTSAQLPEGLFRVRVRSRTYIVSVEFRKQLALSQLSELPVPREVLQ
GLDVIVREASRWRKIILGKGFYSQDSGQDIGKGVVALKGTQQTLKYTQQGLILCVDYSVM
PFYQAGPVLDLVEKLVRPLDYRTPLKKWQKENLESELKGRRVTVIHRRTNQKYTVQGLTD
LPASQITFVDAESGQKKRLVDYYAQQYSKVIEYQMLPCLDLSKSKDKPNYVPIELCTLIE
GQRYPKANLDKNSDRILKEKALIPAFRRKEEILDLVNATDGPCRGEIAQRFGISLDVQMT
KVMGRILPPPNLKLGTSNGQTCKFSIDQSCQWNLVKKRLVEGRDLQCWGIVDFSARSSHS
RQEPLNGNMFLEKIVRKCRDLGIQMKPEPCFVHLSEMAVLSDPSMLYEELNKAKQAAVNK
KQRLQLLFCPMSEQHPGYKTLKLVCETQLGILTQCFLSPLANKPQGQDQYMTNLALKING
KLGGSNVQLFDALPRVSGVPFMFIGADVNHPSPGNVESPSIAAVVASIDPGASKYVPRIH
AQPHRCEVIKQLGEICRELIGVYEKQNGVKPQKIIYFRDGVSDGQFEMVLNEELADMEKA
IKVNGYAPTITVIVAKKRHNTRLFPKDRNEPQTRNGNVPPGTVVDTGVVDPSAYDFYLCS
HNGLLGTSRPTHYYSLMDEHGFGSDDLQKLVYNLCFVFARCTKPVSLVTPVYYADLAAYR
GRLYYEGMMSSQPRRSGSASSSSTGDFEVGSFPRLHKDLEDNMFFI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggactacgagcacggcggtggggcgcgaggccgcgggaggggtcgcggtggcgggcgt
aggggaggcggctacgggcctcgcggaggagggggctacgggcatgacggaagcggtgag
ggtggaggagaaggaggaggctacaacgggacccgtggaggcggaggctaccacgggtct
cgcggaggcggagaaggagggggctatggcgcgggcgggcgcggtgggcgtggccctggc
ggtggcggtggacacgcgtacgtgtcaagcggtgggcgtggcgggaacgcgtgggcgacg
tcggggagaggccgcggaggcggcccaggggagtacgtcccggtgagggcgcctgcgcag
gcgaccacggcgagggggatcgcgaccgaggatgcggcgagctcgtcggggtccgtcgaa
cgcattgtctccagtgatttggccagagtagaaccactagcatcgccaccagttgccaca
tctcctgttgccacacgagtggcaatgcgaagacctgatggtggaggctcatcatttcag
gccaaggtcagacttttggtgaaccatttcattgtcaactaccgagaggcgtcaaccatt
tttcactacgacataaacatcaagcttgatcaagcttcccctaagacttcaagcaaggag
ctctccaaggcagaatttctttctgccaaggatgagctcttcaaggacaacagctttcgg
ttgctttcttcatatgttgcttatgatggcggaagaaatctattcacttcagctcaactg
ccagaaggtttattccgtgtgagagttcggtcacggacctatattgtatcagtggagttc
aggaagcagctggcgttaagccaactctcagagttacctgtgcctagagaggtcttgcag
ggtcttgatgtcattgtgcgtgaggcctcacgctggcgcaagattatccttggtaaggga
ttttactcacaggacagtggtcaagacatcgggaagggtgttgtagctctgaaaggaacc
caacagacacttaaatacactcagcaagggctgatcctatgcgtagactattcagttatg
ccattttaccaagctgggccagtgctagatcttgttgagaaattagtgaggcccctagat
tacaggacaccactgaaaaagtggcaaaaggaaaatttggagtctgagcttaaaggccga
cgtgtaactgtgattcaccgaaggacaaatcaaaagtacactgttcaaggcttgacagac
ttgcctgccagtcagattacctttgtggatgctgaatccgggcaaaaaaagaggctagtt
gattattatgctcaacagtatagcaaggtgattgagtatcagatgctcccatgcttggat
ttgagcaagagcaaggacaaaccaaattatgtgccaattgagctttgcactcttattgaa
gggcagaggtatccaaaggcaaacttggataagaactccgatagaatactgaaagagaag
gccctaatccctgcatttaggcgtaaggaggagattctggacttggtgaatgctacagat
ggaccttgcaggggagaaatagcccagcgatttgggatttccttggatgttcaaatgaca
aaagtcatgggtaggatccttcctccacccaacctaaaactcggcacctccaacggccag
acctgcaaattcagtattgatcagtcctgccagtggaaccttgtgaagaagagactagta
gaaggccgggatcttcagtgctggggcattgtcgacttcagtgcacggtcatctcactcc
aggcaggagcccctcaatggaaacatgtttcttgaaaagatcgtgaggaagtgccgtgac
cttggcattcagatgaaacctgaaccatgttttgtgcacctgtcagaaatggcagtgcta
tctgatcccagcatgctatacgaggagctaaacaaagcgaagcaggctgcagtgaacaag
aagcagaggctgcagctactcttctgcccaatgtctgagcagcatccagggtacaagaca
ctgaagctggtctgcgagacgcagctggggatcctgacccagtgtttcctgagccccctc
gcgaacaagccgcagggccaggaccagtacatgaccaaccttgctctcaagatcaatgga
aagcttgggggcagcaacgtacagctgttcgacgcgctcccacgggtcagcggcgtgcct
ttcatgttcatcggcgctgacgtgaaccacccgtcgcccgggaatgtggagagcccgtcc
atagcagccgtggtcgcgtccatcgaccctggcgccagcaagtacgtgccaagaatccac
gcccagccgcaccgctgcgaggtgatcaagcaactcggtgagatctgccgggagcttatc
ggcgtctacgagaagcagaacggcgtgaagccgcagaagatcatctacttccgtgacggc
gtgagcgacgggcaattcgaaatggtcctcaacgaggagctggcggacatggagaaggcg
atcaaggtgaacggctacgcgccgaccatcaccgtcatcgtggccaagaagcggcataac
acgcgcctgttccccaaggacaggaatgagccgcagaccaggaacggcaacgtgccgcca
ggcacggtggtggacaccggcgtggtcgacccgtcggcgtacgacttctacctgtgcagc
cacaacgggctgctggggacgagccggccgacgcactactacagcctgatggacgagcac
gggttcgggtcggacgatctgcagaagctggtgtacaacctatgcttcgtgttcgcgcgg
tgcaccaagccggtgtcgctggtgacgcctgtgtactacgccgacctcgcggcgtaccgc
ggcaggctctactatgagggcatgatgtcgtcccagccccggaggagcgggtcggcatct
tcctcatccacgggggattttgaagtcgggagctttccgaggctgcacaaggatctggag
gacaacatgttctttatctga
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