Phragmites australis (common reed): 133886806
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Entry
133886806 CDS
T10575
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00061
Fatty acid biosynthesis
paua00071
Fatty acid degradation
paua01100
Metabolic pathways
paua01212
Fatty acid metabolism
paua04146
Peroxisome
Module
paua_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
133886806
00071 Fatty acid degradation
133886806
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133886806
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
paua01004
]
133886806
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133886806
Enzymes [BR:
paua01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
133886806
Lipid biosynthesis proteins [BR:
paua01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133886806
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of breast milk
133886806
Exosomal proteins of breast cancer cells
133886806
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
133886806
NCBI-ProteinID:
XP_062182634
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Position
12:complement(1813959..1825782)
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AA seq
703 aa
AA seq
DB search
MARKEQEQSSMGAAERRLRAVSAHLQPPASAGGCDLAANPTAGEYAHVQGYSVVLPEKLQ
TGKWNVYRSAHSPLRLINRFPGTPDIGTLHDNFVYAVETFRDCRYLGTRIGADGTAGDYK
WMTYGEASTSRTAIGSGLIYHGIPEGACIGLYFINRPEWIIVDHACAAYSYVSVPLYDTL
GPDAVQFIVNHAAVEVIFCVPQTLSTLLSFITQMPCVHLIVVVGGDDAKMPSAPATTRLE
ISTYSRLHYEGKMNPQPFRPPKPEDVATICYTSGTTGAPKGAVLSHENLIANVAGSSLDI
KFYPSDVYISYLPLAHIYERANQAALLHYGVAVGFYQGDNLKLMDDLAALRPTVFASVPR
LYNRIYAAITHAVKESGGLKERLFHAAYNAKRQAIINGKNPSSMWDKLVFNKIKARLGGR
VRLMFSGASPLSPDVMEFLRICFGGEVLEGYGMTETSCVISTMDIGDKLIGHVGSPNPSC
EVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFRGYYKDEVQTREVIEEDGWLHTGDIGLW
LPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSFNSSLIAIVAVE
PEVLKAWAASERIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEFAKAVTLVAEPF
TLENGLLTPTFKVKRPQAKAYFAKEISDMYEQLRETESARPKL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaaggagcaggagcaatcctcaatgggcgccgccgagcgccggctccgcgca
gtctccgcccacctccagccgccggcgtccgccggaggctgcgacctcgccgccaatccc
accgccggcgagtacgcccacgtgcaaggctacagtgttgttctccctgagaagttgcaa
accggaaagtggaacgtgtaccgatctgcacattcgcctttaaggttaataaacagattt
cctggtactcctgacattggaacgctgcatgataattttgtgtatgcagttgagactttt
agagattgtagatatctgggtacaagaatcggcgcagatggaacagctggagactacaaa
tggatgacatatggagaagctagcacgagcagaactgcaataggttctggtctcatttat
catggaatacctgaaggtgcatgcattggtctgtattttataaacagacccgagtggatc
atagttgaccatgcttgtgctgcatattcatatgtatctgtgccactttatgatactctt
ggtccagatgcagttcaattcatcgtgaaccatgcagcagtagaagttattttctgcgtg
cctcaaacactaagcactcttttaagctttataactcaaatgccttgtgttcaccttatt
gtggtagttggtggagatgatgcaaagatgccatctgcacctgcaactaccaggctggaa
attagtacttactccagactacactatgagggaaagatgaatcctcaaccttttcgtcct
ccaaaacctgaagatgtagccactatctgctacactagtggcactactggcgcaccaaag
ggagctgttctttctcacgagaacttaatcgcaaatgtagcaggatcaagcctggatatt
aagttttacccctctgatgtgtatatctcatatctacctctggctcacatctacgagagg
gctaaccaggctgcattgcttcactatggtgttgctgttggattctaccaaggggataat
ttgaagctaatggatgatctggcagctttgagaccaacagtatttgcaagtgttccccgg
ttatataacagaatttatgctgcaattacacatgctgtgaaggagtctggagggttgaaa
gaaagattgtttcatgctgcatacaatgccaagaggcaagcgattataaatgggaaaaat
ccatcgtcaatgtgggacaagttggtatttaacaaaataaaagctaggcttggcggacga
gtgagacttatgttttcaggggcttctccattgtcgccagatgtcatggaatttctaaga
atatgcttcggtggtgaagttcttgaagggtatgggatgacggagacatcttgtgtcatc
agtacaatggatattggtgataaattaattggtcatgttggatctccaaatccttcttgt
gaggttaaacttgtggatgtcccagaaatgaactatacttcagaggatcaaccatatcct
cgtggagaaatttgtgttagggggcctataatattccgtggttactataaagacgaagtc
caaacaagagaggtcattgaagaggatggttggttgcatactggagacataggtttgtgg
ctgcctggagggcgtctgaaaattattgataggaaaaagaacattttcaagttagcccaa
ggagaatacatagccccggagaaaattgagaatgtatacgccaagtgcaagttcattgcc
caatgctttatatatggtgatagtttcaactcttccctaattgccatcgtagcagtcgaa
ccagaggtgttgaaggcttgggctgcatcagaaagaatccagtacgaggacttaagacag
ctctgtgctgatcctagagcaagagctgctgtcctggctgacatggattctattggaaag
gaagcgcagctaagaggatttgaattcgccaaagctgttacccttgttgctgaaccattc
acattagaaaatggtctcctcaccccaacattcaaggtcaaaagaccacaagccaaggca
tacttcgcaaaagaaatctcagatatgtatgaacaactgcgtgagacagagtcagctagg
ccgaagttgtaa
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