Phragmites australis (common reed): 133886859
Help
Entry
133886859 CDS
T10575
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133886859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133886859
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
133886859
U7-dependent histone pre-mRNA processing factors
133886859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
133886859
NCBI-ProteinID:
XP_062182731
LinkDB
All DBs
Position
12:4623787..4629571
Genome browser
AA seq
496 aa
AA seq
DB search
MAAAPAGAQNRCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYK
DEETALSARRNLQGYEINGRQLRVDFAENGRNTDRNREKGRGGPGMASTVDNQKQLTGTS
VVGDSSLHQPVGLPPAIHAASVMAGVLGGAQTANVQNGLPVQYGLGNDPLTHYLARMSRH
QLHEIMAELKSLTTQNKELSKNLLQGIPQLPKALFQVQIMLGMVTPQMMQMAKGQQPSSS
LAQSSSHLNEPQPDAMIPVVSRPSSLPANIPPNPLVLQEPTVTLHNFPQYQHASQPPVKI
FRHGHQSGVATHPPMLSQPLGGSSNVPTQPLVTSVGLISQMQPPFMPQQSRPPVMPTNVQ
QLQLSHPHLPQVAAAPETLPNEIRVVDQSSHMAEFAHPSKLRKLEDGTSVPGMVNNSPPV
CTAPSQAVAPSGLSGSYSAGSASFQQPENEVTQLTPDVESALLQQVLQLTPEQLSSLPLE
QQQQVIQLQKMLSAGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctccagcgggcgcccagaaccgctgcgtcttcgtcggcaacataccgtac
gatgcgacggaggagcagcttgtgcagatttgcgaagaagttggcccagtcgtatccttc
agattggttattgataaagaaactggaaaaccaaagggttatggcttttgcgagtacaag
gatgaggagactgctctaagtgcacgccgcaaccttcagggttatgagattaatggccgc
cagttgcgtgttgattttgctgaaaatgggaggaatactgacagaaatagagaaaagggt
cgtggaggaccaggaatggcttctactgttgataatcagaaacaattaactgggacttct
gttgttggagattcaagccttcatcagcctgttggtcttccaccggcaatacatgccgca
tctgtgatggctggtgttcttggaggagctcaaactgcaaatgttcaaaacggtttacct
gtccagtatggacttggaaacgaccctcttactcattatttggccagaatgtcaaggcat
cagttgcatgaaatcatggctgaattgaagtccctaactactcaaaataaggaactttcc
aaaaatttgctgcaaggaattccacagctgccaaaggccctatttcaggtgcaaataatg
ctcgggatggtgacgccacagatgatgcagatggcaaagggccaacagccctctagctcc
ttggcacaatcttcatctcacctcaatgaaccacagccagatgctatgattccagttgtc
tcgagaccgtcgagtttgccagctaacataccaccaaaccctcttgtcctgcaggaacca
actgtaacactacataattttcctcagtatcaacatgcatctcagcctccagtcaaaatc
tttcgacatggacatcagtctggggtggccacacatcctccaatgctatcacagcccctc
ggcggttcttccaatgttcctactcaaccccttgtgacatcagtaggcttaatttcacaa
atgcagcccccatttatgccacagcaatctagaccaccagttatgccgacaaatgtacaa
cagctacagttgagccaccctcatctccctcaggtagctgctgcacctgagacactacca
aatgaaataagagtggttgatcaatcaagtcacatggcggagtttgctcatccttcaaag
ttgagaaaattggaggatggaacctctgtgcctggaatggtaaacaacagccctcctgtt
tgtactgctccatcgcaagcagtggctcctagtggactatcagggagctatagtgctggt
tctgctagctttcagcaaccagagaatgaagtgacacagctcacacccgacgtggaatca
gctcttctgcagcaagtattgcagctgacacctgagcagctgagttcattgccactagag
cagcagcagcaggtgattcagctccagaagatgctatcagctggtagatag
DBGET
integrated database retrieval system
