Phragmites australis (common reed): 133886888
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Entry
133886888 CDS
T10575
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.13 isoform X1
KO
K14487
auxin responsive GH3 gene family
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133886888
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
133886888
NCBI-ProteinID:
XP_062182777
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Position
12:23372914..23384027
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AA seq
649 aa
AA seq
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MDLTMSTTTTSTSRAPDHDHGHHLSSSSPAIQPPSLPPLIPACDPHDGPACLQLIEDLTT
HSGAMQQRVLDRILAMNAGTDYLRGFLGDVEGRNTSELGAAFKERVPVVEYEDIKPYIER
ISNGGPSSLISYKPITELLTSSGTSGGQPKLMPSTEEELDRKTFLYNLLVPVMNKYVEGL
DEGRGMYLLFVKPEITTASGLVARPVLTSYYKSGHFRQRPDSPYTRYTSPNEAILCPDSA
QSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWRALCDDIRAGRVDARVTDPAC
REAVARVVAHPVPALADAIAAECAAGSWQGIVRRLWPRTKYIDVIVTGSMAQYIPLLEFY
GDGLPLVSTMYASSESYFGINLRPLDKPEDVAYTLLPNMCYYEFIKVEKDSEEVREGKVV
NLIDVEVGGYYELVVTTFTGLYRYRVGDILQVSGFHNAAPQFRFVHRRNVVLSVDTDKTS
EDDLLRAVTAAKRLLAPLGGAILSEYTAYADTTSIPGHYVLFWELTPPLPSHDDAAVARI
MASCCAAVEAGLDAVYRRCRSRDRSVGPLEIRVVSPGAFDALMDLCVSHGSSVNQYKTSR
CIKHPDAIAVLEARVVGRFFSDGVPHWEPFKVEANHAGANANADGASAS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacaatgtcaaccacgacgacgtccacgtcccgtgcgcccgaccatgaccat
ggtcaccacctctcttcctcctcgccggcaattcaaccgccatcgctgccgccgctcatc
ccggcctgcgacccgcacgacggcccggcgtgcctgcagctcatcgaggatctgaccacc
cactccggcgccatgcagcagcgcgtcctcgacaggatcctcgccatgaacgcaggcacg
gactacctccgcggcttcctcggcgacgtcgagggccgcaacaccagcgagcttggcgcc
gcgttcaaggagcgcgtgccggtcgtggagtacgaggacatcaagccgtacatcgagcgc
atctccaacggcggaccctcgtcgcttatctcctacaagcccatcaccgagctcctcacg
agctccggcacgtcgggcggccagccgaagctgatgccgtcgacggaggaggagctcgac
cgcaagaccttcctctacaacctcctcgtccccgtcatgaacaagtacgtggaagggcta
gacgaggggagggggatgtaccttctgttcgtgaagccggagatcacgacggcgtcgggg
ctggtggcgcggccggtgctgacgagctactacaagagcggccatttccggcagcggccg
gacagcccgtacacgcggtacacgagccccaacgaggctatcttgtgcccggacagcgcg
cagagcatgtacgcgcagctgctctgtggcctcgcccgccgcggcgaggtgctccgcgtc
ggcgccgtctttgcctccgccttcctccgcgccgtcaagttcctcgagggtcactggcgt
gcgctctgcgacgacatccgcgctggtcgtgtcgacgcgcgagtcactgacccggcctgc
cgggaggccgtcgccagggtcgtcgcgcatcctgtcccggcgctcgccgacgccatcgcc
gccgagtgcgcggccgggtcgtggcagggcatcgtgcggcggctatggccgaggaccaag
tacatcgacgtcatcgtcacggggtcaatggcgcagtacatcccgctgctggagttctat
ggcgacggcctgcctctggtgtcgacgatgtatgcgtcgtcggagtcctacttcgggatc
aacctccggccgctggacaagccagaggacgtggcgtacacgctgctgcccaacatgtgc
tactacgagttcatcaaggtggagaaggacagcgaggaggtccgggaggggaaggtggtg
aacctcatcgacgtcgaggtcggcggctactacgagctcgttgtcacgacgttcacaggt
ctgtaccggtaccgcgtgggcgacatcctgcaggtgtcgggcttccacaacgcggcgccg
cagttccggttcgtgcaccgccgcaacgtggtactcagcgtggacaccgacaagacctcc
gaggacgacctcctccgcgctgtcaccgccgccaagcgcctcctggccccgctcggcggc
gccatcctctccgagtacaccgcctacgccgacaccacctccatcccgggccactacgtc
ctcttctgggagctcacccctccactgccgtcccacgacgacgccgctgtggcccgcatc
atggcgtcgtgctgcgccgccgtggaggccgggctggacgccgtgtaccggcggtgccgg
agccgcgatcggtccgtggggcctctggagatccgcgtggtgtcccccggggccttcgac
gcgctcatggacctctgcgtctcccacggctcgtcggtgaaccagtacaagacgtcgcgc
tgcatcaagcaccccgacgccatcgccgtcctggaggcccgcgtcgtcggccgcttcttc
agcgacggcgtgccgcactgggagccgttcaaggtcgaagccaaccacgccggcgccaac
gccaacgccgacggcgccagcgccagctga
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