Phragmites australis (common reed): 133886905
Help
Entry
133886905 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133886905
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133886905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133886905
03016 Transfer RNA biogenesis [BR:
paua03016
]
133886905
03029 Mitochondrial biogenesis [BR:
paua03029
]
133886905
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
133886905
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
133886905
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
133886905
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
133886905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
133886905
NCBI-ProteinID:
XP_062182801
LinkDB
All DBs
Position
12:204371..207630
Genome browser
AA seq
693 aa
AA seq
DB search
MAALLFYDLSLLPSSGGGGGNSTSSSRSILAAARALELGYAAVAFDQPHRGLLADSDRCH
TQPFPPFSSIPLPSSAALHRRRLASPISEPFRQYTRITLSLDSAAAVASALAPSAARLLR
TYDLVAARPLTQAAFDHLCQVPYSHHLDLISIDFSHGHKLPFRLKLPMLKIALQRGLHFE
IAYSPIATDFNSGKNLLAEAKLLVDWTKGKNLIISSAAHTATEIRGPYDVINLCSYLLGL
PMHRAKAAISTNCRSLISKALRKKHFYKETIRIDRMLPDEKLNSTKFKLDDWIGWDSVSC
TGDPQFTETNQLEPSSNKDELPSSPIYGVIEVSHEKPHNPNPSIIAKLPEQSTDEEEIPS
QTQGETVQVGRGEVLMDCGLSILPTSFGHQNVVLDKPRNNEDVMDHFVQAGSGHSVDLKN
IDKHVGFAQDAMEVDATESCRLNLIVVDSSIKIACSVLPQGMELSGTSLEDKGPGQSSEI
LYNAKAYTKYHTDCTTCEREKTPLDHENRSGSNVCSGDKDVYQSNDIPVDTEAYSSTSKP
VECPPGGIDDEEAIEQSMDENIEQTAVGEVESTDIKTRTNISVEPMFHGQETISTGYIYD
KRSTDACCESDELKEQNSEETYASLEKNSAKPHEQLLNYSYPSGKVEISTIKSEKRRRKL
RLHHPAYCPFLGFLKSVHFKKKVCKVRGLVKPM
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgctcttctacgacctcagcctcctcccctcttccggcggcggcggtggc
aactccacctcatcctcccgctccatcttagccgccgcccgcgccctcgagctcggctat
gccgccgtcgctttcgaccaaccccaccgcggcctcctcgccgactcggaccgctgccac
acccaacccttcccgcccttctcttctatcccgctcccctcctccgctgccctccatcgc
cgccgccttgcctcccccatctccgagcccttccgccagtacacgcgcatcactctctcc
ctcgactccgccgccgccgtcgcttccgccctcgccccctccgccgcccgcctcctccgc
acctacgacctcgtcgccgcccgccccctcacccaggccgcattcgaccacctctgccag
gtcccctactcccatcaccttgatctcatctccatcgacttctcccacggccacaagctg
cccttccgcctcaagctccccatgctcaagattgcgctgcagagggggctgcatttcgag
atcgcctactcccccatcgccactgatttcaattcagggaaaaacctcttagctgaagcc
aagctcttggtggactggactaaaggaaagaatctcatcatctcaagtgctgctcacact
gctacggaaatcagagggccctatgatgtcatcaatctatgttcttatctgctcggcctt
cccatgcaccgagcaaaagctgctatctccacaaactgcaggtcattgatttcaaaggct
ctgaggaagaaacatttctacaaagaaacaattagaattgatagaatgttaccagatgaa
aagctgaattcaacaaaattcaagcttgatgattggattggttgggattctgtatcatgc
acaggtgatccgcaattcacagagacaaatcagctggaaccttcttccaacaaagatgaa
ctacctagttcacccatatatggtgtgatagaagtgtctcatgaaaaacctcacaatcct
aatccgtctatcattgctaaactgccagagcagtctactgatgaagaagaaatcccatct
caaactcaaggagagactgttcaagttggcagaggtgaagttctaatggattgtggcctg
tctatcttgccaacatctttcggtcatcagaatgttgttctagataagcctcgaaacaat
gaagatgttatggatcatttcgtgcaggctggttctggccattctgttgacctgaaaaac
atcgacaagcatgttgggtttgctcaggatgcaatggaagtagatgcaacagaatcatgc
agattgaacctcattgtggttgacagtagtattaaaatagcatgttctgttcttccccag
ggtatggagctttctggtactagtcttgaggataagggtcctggccaatctagtgaaatc
ctatataatgctaaggcttatacaaaatatcacacagattgcaccacctgtgagagggag
aagaccccactggatcatgaaaatcgttctggttctaatgtttgctctggtgacaaggat
gtgtaccagtctaatgatattccagttgatactgaggcttacagtagtacttcgaaacca
gtagagtgtcccccaggtgggatagatgacgaggaagcaatagagcaaagcatggatgaa
aacatagaacagactgcagtgggtgaagtagaatctactgacataaaaacaagaacaaat
atttcagtggagcctatgttccatggtcaagagaccatctcaactggttatatttatgat
aaaagatccactgacgcatgttgtgaaagtgatgagctgaaagaacaaaactctgaagaa
acctatgcttctttggagaaaaatagtgctaaaccacatgagcaattactgaattattct
tatccaagtggtaaggttgagatatccacaattaaatcagaaaagcggagacgtaaatta
aggttgcatcatccagcttattgtcctttcttgggcttccttaaatctgtgcatttcaag
aagaaagtatgcaaagtaagaggccttgtcaagcctatgtaa
DBGET
integrated database retrieval system
