Phragmites australis (common reed): 133886926
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Entry
133886926 CDS
T10575
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
paua Phragmites australis (common reed)
Pathway
paua04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133886926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
paua04040
]
133886926
Ion channels [BR:
paua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133886926
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Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
133886926
NCBI-ProteinID:
XP_062182820
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Position
12:complement(4792827..4797025)
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AA seq
735 aa
AA seq
DB search
MAAFIHRHILPPFRRPPLPFFHPGAARGPSSALPAGRRPWTPRRILDPGDDVVLRWYRLF
LVTCLVGLFVDPMYFYLLHTDGLQSCVSMDMGIGVLVTAVRTVADLFYLAHMILKFRIAF
VAPSSRIFGRGELVRDPDQIAIRYLKNDFIIDLAAMLPIPQVIIWFVIPAVSTSSANHTN
NTLSMIVLIQYIPRVFLIISLNSKIVKTSGVVTRTAWAGAAYNLLLYTLASHVLGALWYL
LSIERQYTCWMEVCTKENGTAGDIPRCFMSYLDCKSKENPIRQTWHNHSEIRKQCLLPDA
IYEYGLFADALNLDSSGVAFIDKYLYCLWWGFRNLSSYGQNLQNSTYKGETIFCILICIM
GLVFFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPPELQERVRRFFQYKWLA
TRGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVSSLSTKDA
YIVREGDPVSEMLFIIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWALMPNPSLN
FPQSTRTVRSLTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSWGACFVQG
AWRRYKKRKLAKELMKQEGIYYQDAGTGGGDDDGYGPGLGGGDNDVDGDGAPLLGEYKGQ
HGAGAAAAEGADGGGGAHLGVTFLASKFAKNTKRGAAQHQKMITHQRIDDVSTMKFPKLA
KPDEPDFSLHTDDVL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttcatccaccgccacatcctccctcccttccgccgcccgccgctccctttc
ttccacccgggcgccgccagggggccctcctccgcgctgcccgcaggccgccgcccgtgg
acgccccgccgcatcctcgacccgggcgacgacgtcgtcctccgctggtaccgcctcttc
ctcgtcacctgcctcgtcggcctcttcgtggaccccatgtacttctacctcctccacacc
gacggtctccaatcctgcgtctccatggacatgggcatcggcgtcctcgtcaccgccgtc
cgcaccgtcgccgacctcttctacctcgcacacatgatcctcaagttccgcatcgcgttc
gtcgcgcccagctcccgcatcttcgggcgcggcgagctcgtccgggaccccgaccagatc
gccatccgatacctcaagaacgacttcatcatcgaccttgccgctatgctcccgatcccg
caggtgattatctggtttgttataccagctgtgagtacctcctcagccaatcacaccaac
aacacgctctcgatgatcgtattgatccagtacataccgcgagtgtttcttataatatcc
ttgaactctaagattgtgaagacgagtggagtagtcacaaggactgcttgggcaggggcc
gcgtacaacttgcttctttacacattggctagtcatgttcttggcgctctgtggtatctg
ctgtccattgagcggcagtacacctgctggatggaagtgtgcacaaaagagaatggcact
gcaggagacatccctagatgttttatgagctatttggactgcaaaagcaaggaaaatccc
atacgtcagacttggcataaccatagtgagatcaggaaacagtgcctacttcctgatgcc
atatatgaatatggattatttgctgatgcactgaatctggatagttctggggtggccttc
atcgacaagtacctctactgcctctggtggggtttccggaacctgagttcctatggacag
aacttgcagaacagcacctacaagggggagaccatattctgcattctgatatgcatcatg
ggccttgtcttcttttcacatctcattggaaacatgcagacgtacttgcagtcgatgaca
gtgaggctggaggagtggcgggtgaagcgccgggacatcgaggagtggatgcggcaccgt
cagctgcccccggagctccaggagcgcgtgcggaggttcttccagtacaagtggctcgcc
acgcggggcgtcgacgaggagtccatcctccagtcgctgccgctggacctccggcgcgag
atccagcggcatctctgcctcgccctcgtccggcgcgtgcccttcttctcgcagatggac
gagcagctgctggacgccatctgcgagcgcctggtgtcgtcgctgagcaccaaggacgcg
tacatcgtgcgggagggcgaccccgtgagcgagatgctcttcattatccgcggcgagctg
gagagctcgacgacggacggcgggcggaccaacttcttcagctccatcacgctgcgcccg
ggggacttctgcggggaggagctcctgacgtgggcgctgatgcccaacccgagcctcaac
ttcccgcagtccacgcgcaccgtgcggtcgctgacggaggtggaggcgttcgcgctccgc
gccgaggacctcaagtacgtggccaaccagttcaagcggctgcacagcaagcggctgcag
cacgcgttccggtactactcgcaccagtggcgcagctggggcgcgtgcttcgtgcagggc
gcgtggcggcggtacaagaagcggaagctcgccaaggagctcatgaagcaggagggcatc
tactaccaggacgccggcaccggcggcggcgacgacgacggctacgggcccggcctcggc
ggcggcgacaacgacgtcgatggcgacggcgcgccgctgctcggcgagtacaagggccag
cacggcgctggcgcggccgcggcggagggcgcggacggcggcggcggcgcgcacctcggg
gtgacgttcctggcgtccaagttcgccaagaacaccaagcgcggcgcggcgcagcaccag
aagatgatcacgcatcagaggatcgacgacgtgtccaccatgaagttccccaagctcgcc
aagcccgacgagccggacttctccctgcacaccgacgacgtgctgtga
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