Phragmites australis (common reed): 133886964
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Entry
133886964 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase BOI-like
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133886964
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133886964
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133886964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
CC_CDK5RAP2
Motif
Other DBs
NCBI-GeneID:
133886964
NCBI-ProteinID:
XP_062182862
LinkDB
All DBs
Position
12:24568247..24569641
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AA seq
325 aa
AA seq
DB search
MAVQAQFGGVTGCLAEEQVRALRDYGVTAGNTGYGCQYNCAGVVSGAQSELTCNTGGGVV
KSWKRGREVEPEQYVSTSTAALLPIPGMHMAAVVQQALTPVVAASRMVESAMTSTSGGTA
AASASVADALVLELCQQGAEVDALVWAECERLRAGLEHARKRQRQAVARAAAGAAARMLR
EKETELDAVRRLAADLEERLRQAAAESQAWCGLARSNEAVAAGLQATLDHVLLRGGGGCP
ASAEGFGESDPTFSPAAADDAQSCCFEAKDAPVTKWSCKACGELEASVLLLPCRHLCLCK
ACEPRLDVCPVCLAAKNASIHIAAN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaagcgcaattcggcggggtcaccgggtgcttggccgaggagcaggtgcgg
gcgctcagggactacggcgtcaccgcgggcaacactgggtacgggtgccagtacaactgc
gccggcgtggtcagcggcgcgcagagcgagctgacctgtaatactggtggtggggtggtg
aaatcgtggaagcgcggcagggaggtcgagcccgagcagtacgtgtcgacctcgacggcg
gcgttgctgccgatcccggggatgcatatggcggctgttgtgcagcaggcgctgacgccg
gtggtcgcggcgagccggatggtggagtcggcgatgacgtcgaccagcggggggaccgca
gcggcatcggcgtcggtggcggacgcgttggtgttggagctatgccagcagggggccgag
gtcgacgcgctcgtgtgggccgagtgcgagcggctgcgcgcggggctagagcatgcgcgt
aagcggcagcgccaggcggtggcgcgggccgccgcgggcgccgcggcgcgcatgctgcgg
gagaaggagacggaattggacgccgtgcgccggctcgccgcggacctcgaggagcggctc
cggcaggcggccgccgagagccaggcgtggtgcggcctcgcgcgcagcaacgaggccgtc
gccgcggggctccaagccacgctcgaccacgtcctcctgcgcggcggcggcggttgcccc
gcttccgctgagggcttcggcgagtccgaccccaccttctccccggccgccgcggacgac
gcgcagtcctgttgcttcgaggccaaggacgcgccggtcaccaagtggtcctgcaaggcg
tgcggcgagctcgaggcgtcagtgctgctgctgccgtgccggcacctgtgcctgtgcaag
gcgtgcgagcccaggctagacgtttgccccgtctgcctcgccgccaagaatgcgtccatc
cacatcgccgccaactga
DBGET
integrated database retrieval system
