Phragmites australis (common reed): 133887117
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Entry
133887117 CDS
T10575
Name
(RefSeq) retinoblastoma-related protein 1-like
KO
K04681
retinoblastoma-like protein 1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133887117
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
133887117
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
133887117
NCBI-ProteinID:
XP_062183024
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All DBs
Position
12:complement(23785718..23792164)
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AA seq
986 aa
AA seq
DB search
MAAQTPPKPPAVEARLADLCKELGVEEGVAGEAAALLEEGKGALLVSPSFGSRSREDAER
LCLAFVLYCAARLKGRKEGSGVRLCEILKGCKLEYDDFFKEAQQLGLKIDKLLESRYGLD
WEGWLELKQLESLVKLLTDASRFYRKAYNELFSSASTDQKSGSTTNTPEYILFGWHLFLM
LRSRSPELFKDLVSCIHGLVAVLAILLIHVPSKFRSFTIEGSSHLIKRTEKGVDLIASLC
HNYHTSEDRLKDMMGKSHKAIEDFFSMKAISASECKIENLDKIDTDGVMYFKVLLDEECF
QSNLKKLEKLCNSNTREGELDLQLFLINNDYIPRAENSPGGSTNLGCSKRVFETLASPTK
TIKSMLTVPSSPSSPASGSSVKIVQMTPVTSAMTTAKWLREVISSSPEKPSSNLQHFLSS
CDMDLTNDVTKRVSKVLEAIFPTKSSADRGGSIGLNCANAFDIPWAEARKREASKLYYRV
LEAICRAESQNKNVNNLTPLLSNERFHRCLIACSAEIVLATHKTVIMMFPAVLESTGLTA
FDLSKIIENFVRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSLVVTRPSLASEIN
RLGLLAEPMPSLDHLVARQNIHVEGLPATPSKKRAVGPDDNSDPQSPKRLCNESRNTVVE
RNLQTPPPKQSHMVSSSLKAKCHPLQSTFASPTVSNPVGGNEKCAEVTVQIFFSKILKLA
AIRIRNLCERVQHVEQTERVYNLFKQILDQQTALFFNRHIDQLILCCLYGVAKVLGLQSK
VCPLLLSFKEVLNNYKREPQCKPEIFLSIYVGSRNRNGSLGSRHVDIITFYNEVFVPAAK
PFLVTLIPSGTRPEDKNANGQIPGSPKPSPFSNLPDMSPKKVSASHNVYVSPLRQTKMDA
LLSPSSRSFYACIGEGTHAFQSPSKDLAAINNRLNYTSRRINTRINFDMVSDSVVAGSLG
QPNGGSASLDPAAAFSPLSKKRKPDS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagaccccgccgaagcctcccgccgtggaggcgcgcttggcggatctctgc
aaggagctgggagtggaggagggcgtcgccggcgaggccgcggccctgctggaggagggg
aagggcgcgctcctcgtgtcgccttcgttcggcagcagatcgcgcgaggatgccgagagg
ctgtgcttggcgttcgtgctgtactgcgcggcgaggctgaaggggcggaaggagggctct
ggggtcaggctgtgtgagatcttgaagggctgcaagctcgagtacgatgatttcttcaag
gaagcacagcagcttggtttgaagatcgataagcttttagagagccgttatggcctggac
tgggaaggctggctcgagctgaagcaattggagagtttggtaaagctgctgacggatgca
agcaggttctatcgtaaagcatataatgaactattctcaagtgcaagtactgatcagaag
tctgggtcaactacaaatactcctgagtatattctttttgggtggcatcttttcttaatg
cttcgttcaagatcaccagaattgtttaaggacctggtatcctgcatccatggattagtt
gctgtattggccatacttttgattcatgtcccttctaaatttaggagcttcacaattgaa
ggatcttctcacttaatcaaaagaaccgagaaaggtgtggatcttattgcttcattatgt
cataactatcatacctctgaagaccgcttgaaagacatgatgggcaaatctcacaaggca
atagaggacttcttcagcatgaaagcaataagtgcttcggagtgcaaaatagaaaacttg
gataaaatagacacagatggcgtgatgtacttcaaagttcttcttgatgaggagtgtttc
cagtcaaatttgaaaaaactggagaaactatgcaattccaataccagggaaggggagctt
gatttgcagttgtttttgatcaataatgactatatacccagggctgagaactctcctggg
ggctccactaatttaggatgttcaaagcgtgtctttgaaacattagcatcgcctacaaag
acaataaagagcatgttgactgtccctagttccccttcatcacctgccagtggtagttca
gttaagattgtgcaaatgacaccagtaacttctgccatgacaacagctaagtggcttcgc
gaggtgatatcatcatcgccagagaagccttcatctaatctccaacatttcctttcctca
tgcgatatggatttgacaaatgatgttacaaaaagggtcagcaaagttttggaagcaatt
ttcccgaccaagtcttcagcagatcggggtggttccataggcctcaactgtgcaaatgca
tttgatattccatgggcggaagcaagaaaaagggaggcttccaagttgtactatagagtg
ctggaggcaatctgcagagctgaatcacagaacaagaatgtaaataatctaactccattg
ttgtcaaatgagcgttttcatcgatgcttgattgcatgttcagctgaaatagtattggca
acacataagacagtcatcatgatgtttcctgctgttctggagagtactggtctaactgca
tttgatttgagcaaaataattgagaactttgtgagacatgaagaaaccctcccaagagaa
ttgaaaaggcatttaaattcattagaagaacagcttttggaaagcatggcatgggagaaa
ggttcatcgttgtataattcactggttgttactaggccatcgcttgcttcagaaataaat
cgccttggtcttttggctgaaccaatgccatctcttgatcacttagtagcacggcagaat
atccatgttgagggcttgccagctacaccatctaaaaagcgtgctgttggtccagacgac
aacagtgatccccaatcaccaaagagactgtgcaatgaatccaggaacacagtagtagag
cgcaatttgcagacaccaccaccaaagcaaagccatatggtgtcaagtagcttgaaagca
aaatgccatccactccagtccacatttgcaagcccaactgtcagtaaccctgtcggtggg
aatgaaaaatgtgctgaagtaacggtccaaatattcttttccaaaattctgaagttggct
gctattagaataaggaacttgtgcgaaagggttcaacatgtggaacagacagagcgtgtc
tacaacttgttcaagcagattcttgatcaacagacagcattattttttaatagacacatt
gatcaacttattctttgctgcctttatggtgttgcaaaggtacttggcctacagagtaag
gtttgtccattactgctgtcattcaaggaggtactgaacaattacaagagagagccgcaa
tgcaaaccagaaatttttttaagtatctatgttgggagtagaaatcgcaatgggagtcta
ggatcacgccatgtcgatatcattactttttataatgaggtatttgttccagctgccaag
cctttcctggtgacactaatcccttctggtactcgtccagaagacaagaatgctaatggc
caaattcctggatcacccaagccatctcctttctcaaatttaccagatatgtccccaaag
aaagtttcggcttcacataatgtttatgtgtctcctttgcggcaaaccaagatggatgca
ctgctttcaccaagttccaggagtttttatgcatgcatcggtgaaggcacccatgctttt
cagagcccatctaaagatttggctgctataaataaccgcctaaactatactagcaggaga
ataaacactcgaataaacttcgacatggtgagcgactcagtggtagctggtagtctgggc
cagccaaatggtggttctgcctccttggatcctgcagctgcatttagccccctatcaaag
aagagaaaaccagattcttga
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