Phragmites australis (common reed): 133887149
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Entry
133887149 CDS
T10575
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133887149
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133887149
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
133887149
NCBI-ProteinID:
XP_062183075
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Position
12:complement(1422725..1427319)
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AA seq
673 aa
AA seq
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MGAAAAGARSLLVVILLIAVGASSLLHLAAAAADHGVTLRVDPRQVLVDNGVVQVTLSRP
QGHITGVRYNGERNLLHYTGGGNSGGYWDVVWNYPGSDHPTGMIDMLDGTEFKVVSSSEE
QVELSFRSTYNPSRPNSVRLDIDKRLVMLKGSSGFYCYAILEHSKDWPALNISVARLAFK
LNTDKFNYMAVSDDIQRYMPSTADRDGPRGVPLAYKEAVLLVDPKEPQFKGEVDDKYEYS
LDNKDNAVHGWISSNHPDPMGFWVITPSNEFKCGGPMKRDLTSHVGPTSLSVFLGTHYVG
KDMVLKINDGEYWKKVLGPVFVYLNSSPKRGNLRDLWEDATARAQAEASKWPYSFPESRD
FAKAGERGSVTGRLMVRDRYMSSKDDMPAGAAYVGLAAPGQPGSWATESKNYQFWTRASS
SGRFTVGNVRAGVYNLYAWVPGFLGDYMHTSSVTVNPGGAIDLGDLVFQPPRSGPTLWEI
GVPDRTAAEFFVPDADPKYRNGLFLSKDKYRQYGLWERYADLYPENDLVFTVGQSDHSRD
WFFAHVTRKAGDVNVPTTRQIRFNLDRVVAGGTYTLRIAVAAAHMSRLQVQVNGGARRGG
VFTTPAFGDGNAIARHGIHGVQRSFDFPIRGYLLAEGENSISITQTRAFSEFFGVMYDYI
RLEGPPGSSRDRS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgcggctgccggtgcaaggtcactgctggtcgtcatcctgctcatcgccgtc
ggagcgtcgtccctactgcacctcgccgccgccgccgctgaccatggtgttacgttacgc
gtcgaccctcgtcaggtgcttgtcgacaacggcgtggtgcaggtgacgctgtccaggccg
cagggccacatcaccggcgtccgctacaacggcgagcgcaacctgctgcactacaccggc
ggcggcaactcgggagggtactgggatgtggtttggaattatccagggtccgatcaccca
acagggatgatcgatatgttggatggtacagagttcaaagtagtatcctcaagcgaagaa
caagtggagctttctttcaggagcacatataatccatcacgtccaaacagcgttcggcta
gacatcgacaaaaggcttgtgatgctgaaaggcagctctgggttctactgctacgccatc
ttggagcactccaaggattggcctgctctgaacatttcagtggctcggctcgccttcaaa
ctcaacacggacaagttcaactacatggcggtttcagacgacatacagaggtacatgccc
agcacggcagacagagacggacctcgtggtgttccattggcctacaaggaggctgttctg
ctcgttgaccccaaggagccacagttcaaaggggaggtggatgacaagtacgagtactcg
ctggacaacaaggacaacgctgtccatgggtggatcagcagcaaccatccggatcccatg
gggttctgggtcatcacgcccagcaacgagttcaagtgcggcggcccgatgaagcgggac
ctcacctcccacgtcggcccgacctccctcagcgtgtttcttgggacgcattacgttggg
aaggacatggttctgaagatcaacgacggcgagtactggaagaaggtgctggggccggtc
ttcgtctacctcaactcgagcccgaagcgaggcaacctccgggatctctgggaggacgcc
acagcgcgggcgcaagccgaagccagcaaatggccgtacagcttccccgagtcccgggac
ttcgccaaggcaggtgagagaggctccgtcaccggcaggctcatggtcagagacaggtac
atgagcagcaaagacgacatgcctgccggggcggcgtacgtcgggctcgccgcgcccggg
cagcctggctcctgggcgacggagagcaagaactatcagttctggacaagggcgtcgtcc
tccggcaggttcaccgtcggcaatgtccgggcaggggtgtacaatctctacgcatgggtt
cccgggttcctcggagactacatgcacacttcttctgtgaccgtaaacccaggtggtgcc
atcgacctcggcgatcttgtgttccagcccccgagatcaggcccgacactgtgggagatc
ggagtcccggacaggactgcggcggagttcttcgtccctgacgccgaccccaagtaccgc
aacgggctctttctgagcaaagacaagtacaggcagtacggtttatgggaaaggtatgcc
gacctgtaccctgaaaacgatcttgttttcacggttggtcagagcgatcactccagggac
tggttcttcgcgcatgtcacaaggaaggctggcgatgtcaacgtgccaacgacacggcag
atacgattcaacctggaccgcgtcgtggcaggcggcacctacactctgcgcattgctgtt
gcggctgctcacatgtccagattgcaggtgcaagtgaacggaggtgcgaggagaggcggc
gtgtttacgacgccggcgttcggcgacggcaacgcgatcgcgcggcacgggatccacggc
gtgcagcggagcttcgacttcccgatcagggggtacctgctggcggaaggcgagaacagc
atcagcatcacgcagacgagggccttcagcgagttcttcggggtcatgtacgactacatc
cggctggaagggcctcccggatcctcgcgagaccgctcatga
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