Phragmites australis (common reed): 133887428
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Entry
133887428 CDS
T10575
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Module
paua_M00081
Pectin degradation
Brite
Enzymes [BR:
paua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133887428
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NCBI-GeneID:
133887428
NCBI-ProteinID:
XP_062183365
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Position
12:7364924..7366635
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AA seq
390 aa
AA seq
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MGAPSVLALVASVVTMAIAMAAAEYNVVDYGARPDGRTDSATAFLAAWAAACNDTGATAT
PVMRVPAGRFLISQAYFKGPCRSDAGVVVAVDGTVLAPAAVDNTSWIMFHYAHGLEIGGG
TLDGQGQAYWACKTAGRRCPPGTTTLKISQSKNVSVTRLTLLNSKNVHMSIYDSTGVTLQ
GVRIVAPADSPNTDGVHVQLSSGVRILSATVGTGDDCVSLGPGTSDVLITNIKCGPGHGI
SIGSLGGEAGEAGVQNVTVEGVTLTGTQNGLRIKTWGQPNSGSVTGVSFGRVTMRGVHNP
IIVDQNYCPGNIGSCPGKSSGVKITEVVYTDIEGTSATPVAVRFDCSGTNPCTGIRLKDV
NLTYQGKAAQSLCKNAHGSASGVVNPPSCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctccgagtgttctcgcgctcgtggcgtccgtggtgaccatggcgattgccatg
gctgcggcggagtacaacgtggtggactacggcgcgcggcccgacggccggacggactct
gcgacggcgttcctcgctgcgtgggccgcagcgtgcaacgacacgggtgctacggccacc
ccggtgatgcgcgtgccggctggccggttcttgatcagccaggcctacttcaagggcccg
tgccggagcgacgccggcgtggtcgtcgctgtcgacggaaccgtgctcgcgccggcggcc
gtggacaacacgtcgtggatcatgttccactacgcccacggcctggagatcggcggcggg
acgctggacgggcaggggcaggcgtactgggcgtgcaagacggccggccggcgatgcccg
cccggcaccacgacgcttaaaatcagccaatccaagaacgtgagcgtgacgcggctgacg
ctgctgaacagcaagaacgtgcacatgtccatctacgacagcaccggcgtgacgctgcag
ggcgtcaggatcgtcgcgccggccgacagccccaacaccgacggcgtccacgttcagctt
tcgagcggcgtgcgcatcctcagcgcgaccgtcggcacgggcgacgactgcgtctcgctg
gggcctggcacctccgatgtgctcatcacgaacatcaagtgcggcccgggccacggcatc
agcattgggagcctgggcggggaggccggcgaggcgggggtgcagaacgtgacggtggag
ggggtgacgctaacgggcacacagaacggcttgcggatcaagacgtgggggcagcccaac
agcgggtccgtcaccggcgtctccttcgggcgcgtcaccatgcgcggcgtgcacaacccc
atcatcgtcgatcagaactactgccccggcaacatcggcagctgccccggcaagagttcc
ggtgtgaagatcaccgaggtggtgtacacggacatcgaggggacgtcggcgacgccggtg
gcggtgcggttcgactgcagcggcaccaacccgtgcaccgggatcaggctcaaggacgtc
aacctgacgtaccagggcaaggcggcgcagtccttgtgcaagaatgcccacggctcggcg
tccggagttgtcaacccgccgagctgcctgtga
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