Phragmites australis (common reed): 133887429
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Entry
133887429 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133887429
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133887429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133887429
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133887429
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133887429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-Di19
Motif
Other DBs
NCBI-GeneID:
133887429
NCBI-ProteinID:
XP_062183368
LinkDB
All DBs
Position
1:complement(7880175..7881920)
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AA seq
281 aa
AA seq
DB search
MQKKSGKKSAGCGAGAAKKARTSTKEAKLDAVQGKEGETFLTFSMDPDVLECPICFVPFA
AEVYTCRNGHGACANCCIRINRKCWCCSEPIGDFRNRQLENVLAAMITPCNYKKFGCGVS
VKYTDKRSHEETCPYAPYECPFDGCSYSGLLLCHHVRREHPPDAVYDLSYVLGTTVTLHK
DVPFLVLLQPSLGLVFLLLNGGDVLAGRSLSLLCLGPRSHGDVDLEYRMEVNGAEPGALS
LSASGTVPCARRLGSLQAKGFLFVPDAYWGPSGCVSVKVSV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagagtgggaaaaagtccgcgggttgtggcgctggcgctgcaaagaaggcg
aggacttcaacgaaggaggccaagctagacgccgtgcagggaaaggaaggagagactttc
ctgaccttctccatggatcccgacgtgttggagtgtcccatttgcttcgtacctttcgcg
gccgaagtgtacacgtgcaggaacgggcatggtgcttgcgccaactgctgcatccgcata
aataggaagtgctggtgctgcagtgagcccatcggcgacttccggaaccggcaactggag
aacgtcctggccgccatgatcaccccttgcaattacaagaagttcggctgcggagtgagc
gtcaagtacaccgacaagcgtagccacgaggagacctgcccgtacgcgccgtacgagtgc
ccgttcgacggctgtagctacagcgggttgctgctctgccaccacgtccggcgcgagcac
ccgccggacgcggtttacgacttaagctacgtcctgggcacgacggtcacgctgcacaag
gacgtgccgttcctcgtgctcttgcagcccagcttagggctcgtgttcctgctgctcaac
ggcggcgacgtcctggcggggcgttctctgtccctgctctgcctcgggccacgttcccac
ggggacgtggatctggagtacaggatggaggtgaacggcgccgagccaggcgcgctctcg
ctgtcggcgtcgggcaccgtgccgtgcgcccgtcggctcggctcgttgcaggccaagggg
tttctgttcgtgccggatgcatactggggcccctccggctgcgtctccgttaaagttagt
gtgtga
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