Phragmites australis (common reed): 133887945
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Entry
133887945 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133887945 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133887945
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
133887945
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Gene cluster
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
DUF4172
Motif
Other DBs
NCBI-GeneID:
133887945
NCBI-ProteinID:
XP_062183970
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Position
13:28477365..28481814
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AA seq
371 aa
AA seq
DB search
MVSRTFPVMSKLFQHCAAAPTKSVASTGVLLLTILQFFLDFGEAVLHDADGSLKTFFRSC
LSREFADPVVAQRTLEFLIANKAKILTSFPTLIPQFYPLLLKLIASNGERLEKKFSEVLP
LMMSAGSFLPLFLSLMDLPMLVVALEKVERSSGTLIGSSIATIQKSAAPEMLLALMDEAY
TGSAIEDPSGNSGSDDSSPLDLADPMFLDLLKDENDGIAAKHWTSPTISSTLQAAVNSPQ
SDRLKQSLEMAPRFLTLYLATALQDVNNSLLCALIPVVMSRYAAMFPDKVFSFEVRKRLS
DFILAAFQRSPGIIAVLKKPITDRLGEAHDNPAKAKLALHLCWAIGEHGAGGTNCKDVAR
ELFENLELLLY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcggacgttcccggtgatgagcaagctgttccagcactgcgccgcggcgcca
acgaagtccgtggcctccaccggagtgctacttcttaccattctgcagttcttcttggac
tttggggaggcagtcctgcacgatgctgatggtagcttgaaaaccttctttcgttcttgc
ttaagcagggagtttgcagatcctgttgttgcacagcgcacgcttgaattccttatagca
aacaaggcaaagatcctgacctcttttcccaccttgattccacagttctatccattgctg
ctgaagttaattgcatcaaatggtgagagattggagaagaagttttcagaagtgcttccg
ttaatgatgtcagcaggatcttttcttcctctcttcctgtcccttatggatttaccaatg
ttggtggtcgcattggaaaaggtggaaagaagttccggaactcttattggtagtagtata
gctacaatccagaagagcgctgctcctgagatgctccttgcactgatggacgaggcatat
actggttctgcaattgaagatcctagtggtaattcaggttctgatgatagtagtcctcta
gaccttgctgacccaatgttccttgaccttctaaaagatgagaatgatggcattgccgca
aaacattggacatcccctacgatatcttcaacattacaagcagcagttaacagcccacaa
tcagacagattaaaacaatcactggaaatggcacctcgctttcttactttgtacctcgca
acagcactgcaggacgttaacaactcgctcttatgtgctctgattccagtagttatgtca
agatatgctgcaatgttcccagacaaggttttctctttcgaggtgaggaaaaggctatcg
gatttcatattggctgcattccagcgctcccctggcatcattgcagtactaaagaagcct
attactgacagacttggggaggctcatgataatcctgcaaaggcaaaattagcattgcac
ttgtgctgggccattggtgagcatggagctggaggaacaaattgcaaagatgtagcgcgt
gaactatttgaaaatttggagttattattatattaa
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