Phragmites australis (common reed): 133887998
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Entry
133887998 CDS
T10575
Name
(RefSeq) syntaxin-81-like
KO
K08492
syntaxin 18
Organism
paua Phragmites australis (common reed)
Pathway
paua04130
SNARE interactions in vesicular transport
paua04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133887998
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133887998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133887998
Membrane trafficking [BR:
paua04131
]
SNARE
Syntaxin (Qa)
Stx-rER
133887998
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
PAS_2
STN
Motif
Other DBs
NCBI-GeneID:
133887998
NCBI-ProteinID:
XP_062184056
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All DBs
Position
13:23095899..23099745
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AA seq
317 aa
AA seq
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MSRVRDRTEDFKEAVRVAALAHGYTEAQLAALMSSFIIRKPSPKSPFTNAAIKTLESIKE
LERFIVKHRRDYVDLRRTTEQERDNIEHEVGVFVKACKEQIDILKNRINEEEKNGSAKTW
LGTRDERSRLDLIAHQHGVVLILSERLHSVTAQFDRLRSMRFQDAINRAMPRKKIQKKPE
IKPAEPSKSNLVLKSDVSKVGDQEVSTAPVRVQEQLLDDETRALQVELTSLLDAVQETET
KMMEMSALNHLMSTHVLQQAQQIQFLYDQAVEATNNVECGNKELSQAIQRNSGSRTFLLL
FFFVLTFSVLFLDWYNN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggttcgggacaggacggaggacttcaaggaggccgtccgcgtcgccgcgctg
gcccatggctacacggaggcccaattagccgcgctcatgtcgtctttcatcatccggaag
ccgtcgcctaaatcaccttttacaaatgctgcgatcaaaactcttgagagtatcaaggaa
ctcgagaggtttatagtgaagcataggagggactatgtggacctgcgtcgcacaacggag
caagagagggacaacattgagcatgaagttggtgtttttgtaaaagcgtgcaaggaacag
attgatatcttaaagaacaggatcaatgaagaagagaagaatggaagtgcaaagacatgg
cttggcacaagggatgagcgttcccggttggacttgatagctcaccagcacggtgtggtt
ttgattttgagtgagcgtctccactcagtaactgcgcaatttgatcgtcttcggtccatg
cgttttcaagatgctattaatagagcaatgccaagaaagaagattcagaagaaaccagaa
atcaaacctgctgaaccatccaagtctaatcttgttttaaaatctgatgtatcaaaggtt
ggagatcaggaagtatctactgcacccgtgagagttcaagaacaactattggatgatgaa
acacgggctcttcaggtggagttgacaagtcttcttgatgctgtccaagaaacagagaca
aagatgatggaaatgtcagcacttaatcatcttatgtcaacacatgttcttcaacaagct
cagcaaattcagtttttatacgaccaggctgttgaagctaccaataatgtggagtgcggg
aacaaggagctatctcaggcgatccagcgcaacagcggtagtagaacctttctcctgctt
ttcttctttgttcttactttctccgttcttttccttgactggtacaacaactga
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