KEGG   Phragmites australis (common reed): 133888000
Entry
133888000         CDS       T10575                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
paua  Phragmites australis (common reed)
Pathway
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133888000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:paua04121]
    133888000
Enzymes [BR:paua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133888000
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133888000
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-rbx1 Prok-RING_4 REase-ARP
Other DBs
NCBI-GeneID: 133888000
NCBI-ProteinID: XP_062184058
LinkDB
Position
13:complement(23113254..23116904)
AA seq 259 aa
MEARRMDQICLAAVNSQPLVADVEPVKKASGDMPATTGSGCFDCNICLDFAAEPVVTLCG
HLYCWPCIYEWLRPGVESTAGDNSSSARRQCPVCKATLSPDTLVPLYGRGGSSKKSLNGV
AIPRRPMVHRESVEHQNAQSNVNDHDHQSMEGIDLHQPLQHAHHHSGAAGFNFIYPPAPV
GRGLIHSTAGGVLGGMAEAVLPWALRGQLPASMYYTSPYHVAAQNVNPRLRRQQMEIERS
LHQIWFFLFVFVVLCLLLF
NT seq 780 nt   +upstreamnt  +downstreamnt
atggaagctaggagaatggatcagatttgcctggctgctgtcaatagccagcctttggta
gctgatgttgagccagttaagaaagccagcggggacatgcctgcgacaactggaagcgga
tgcttcgactgcaacatttgccttgattttgcggcggagccagtggttactctctgtggc
catctctactgctggccttgcatctacgagtggctgcgcccaggggtggaatcaactgcc
ggtgacaacagcagttcagcaaggcggcagtgtcctgtatgcaaggcaacactctccccg
gacacgcttgtgccactatatggccgcggtgggagctcaaagaaatcgctcaatggcgtg
gccattccacgccgtccaatggtgcaccgagagtctgttgagcatcagaatgcgcagagc
aacgtcaatgaccatgaccaccagagcatggaaggcatcgatctgcaccagccattgcag
cacgcacaccaccattccggagccgctggattcaacttcatctaccctcccgcacctgtt
ggacgtggtttgatccactcaacggctggaggggtgcttggagggatggcagaggccgtg
cttccatgggcactccgtggccagctgccggcgagtatgtactacacaagcccttaccat
gtcgcggcgcaaaacgtgaaccccaggctgaggaggcagcagatggaaatcgagaggtcc
ctgcaccagatctggttcttcctcttcgtgtttgtggtgttatgcttgctcttgttctga

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