Phragmites australis (common reed): 133888162
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Entry
133888162 CDS
T10575
Name
(RefSeq) auxin response factor 12-like
KO
K14486
auxin response factor
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133888162
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
Motif
Other DBs
NCBI-GeneID:
133888162
NCBI-ProteinID:
XP_062184294
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Position
13:complement(30776298..30784892)
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AA seq
806 aa
AA seq
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MSSSSAVSIGQPLPPPPPAPPAEEEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSE
QVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAY
LPAEMGIMSKQPANYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELFARD
IHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRP
QTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTR
ISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRV
SLWEIEPLTTFPMYPSLFPLRVKHPWYSGVAALHDDSNALMWLRGVASEGGFQSLNFQSP
GMGSWGQQRLHPSLLSTDHDQYQAVVAAAAASQSGGYLKQRFLHLQQPMQSPQEQCNLNP
LLQQIVSPEAQNIQSVLSPSAIQQQLHQLQQMQHAHNDQKQKIPSDQTYQVPSSAVLPSP
TSLPSHLREKFGFSDLNVNSSSFISTNSNENMLESNFLQGSSKSMDLSQFNQPIVNEQQQ
QAWKQKFMGSQSMSFGGSVSLNSPTSKDSSFENKISRDAQNQSLFSPQVDNSSLLYNMVP
NLTSNVADSNISTIPSGSTYLQNQMYCCLDDSSGLLQSTGENDPTSRTFVKVYKSGSVGR
SLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS
VWYIKILSPEDVHKMGKQGNDPRYLS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttcgtccgcggtcagcatcgggcagccgctgccgccgcccccgcccgcgccg
ccggcggaggaagagaagaagtgcctcaactcggagctatggcacgcgtgcgccggcccg
ctcgtgtgcctcccgaccgtcggcacgcgcgtcgtctacttcccgcaaggtcacagcgag
caggtggcagcgtcgacgaacaaggaggtggacgggcacatacccaactaccccaacctg
cctccgcagctgatctgccagctccacgatgtcacaatgcatgcggatgtggagacggat
gaagtgtacgctcagatgacactgcagccgctgaacccgcaagagcagaacgatgcgtac
ttgcccgcggagatggggatcatgagcaagcagccagcgaattacttctgtaagacgctg
acggcaagcgacaccagcacgcatggcgggttctctgtgccccgtcgtgctgcggagcgc
gtcttcccccctctggatttcacacagcagcctccagcacaggagcttttcgcacgggat
attcatgatgtggagtggaagttcaggcacattttccgaggccaacccaaaagacacctg
ctgactactggctggagtgtgtttgtcagtgctaagagacttgttgctggagattctgtg
ctgttcatatggaatgagaaaaaccaacttttgcttggaatcagacgcgccagccggcca
cagactgtgatgccctcttctgttctttcgagtgacagcatgcacatagggctccttgcg
gcggcagctcatgctgccgccaccaacagccgcttcacaattttctataatcccagggca
agtccatcagaatttgttataccactttcgaaatacatcaaggctgtttttcacacccgt
atatcagttgggatgcgattcaggatgttgtttgagactgaggaatctagtgtccgcagg
tatatggggacaataacagaagtaagtgatgccgacccagtgcgttggcctagttcctat
tggagatcagtgaaggttggttgggatgaatcaaccgctggagaaaggccgccaagagtt
tctctgtgggaaattgagccattgacaacatttcctatgtatccatccctgttccctctg
cgagtaaagcatccatggtattctggagttgctgctcttcatgatgacagcaatgctttg
atgtggctgagaggagttgctagtgaaggaggctttcagtctttgaactttcagtcacct
ggtatgggttcctggggacaacagagactccatccatccttactaagcactgaccatgat
cagtaccaagcagtggttgccgccgccgccgcctctcagtctggtggttatctgaagcag
cgatttctacaccttcaacaacctatgcagtcccctcaggaacagtgcaacctcaatccg
ctgttgcagcaaatagttagtcctgaggctcaaaatattcaatctgtgctcagcccaagt
gctatccagcagcagctccaccagctccagcaaatgcagcatgctcataatgatcagaag
cagaagattccatcggatcaaacttatcaagttcctagcagtgcggttctccccagtcca
acttcactaccaagccatttgcgtgaaaaatttggcttctccgatcttaatgtgaactct
tcaagcttcatcagcactaacagcaatgaaaacatgctggaatcaaactttcttcaggga
agctcgaaatctatggacttgtctcaattcaaccagccaatagttaatgagcagcagcaa
caggcatggaagcaaaaatttatgggctcacaatcaatgtctttcgggggctcagtttca
cttaactcacccactagcaaagatagttcttttgagaacaaaatcagccgtgatgcgcag
aaccagtccctttttagtcctcaagttgacaattcatccctactgtacaatatggttcct
aatctgacttcaaatgtagcggatagtaatatatcaacgattccctctggatcaacatac
ctgcaaaatcagatgtattgttgtctggatgactcttctggtttattgcaaagtacagga
gagaatgatccaacgtccagaacatttgttaaggtttacaaatcaggatcagtggggagg
tcattggacatcacccggttctctaattatgctgaacttcgagaggaactgggtcagatg
tttggcattaggggtcaattggatgaccctgatagatcaggctggcagcttgtatttgtt
gacagggagaacgatgtgcttctccttggagacgacccgtgggagtcatttgtgaatagt
gtatggtacatcaagatactttcacctgaggatgtgcataagatgggaaagcaaggaaac
gatccacgctacctatcttaa
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