Phragmites australis (common reed): 133888166
Help
Entry
133888166 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133888166 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133888166
03400 DNA repair and recombination proteins [BR:
paua03400
]
133888166
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
133888166
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133888166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
AAA_17
NB-ARC
KTI12
Motif
Other DBs
NCBI-GeneID:
133888166
NCBI-ProteinID:
XP_062184299
LinkDB
All DBs
Position
13:complement(28944905..28948316)
Genome browser
AA seq
703 aa
AA seq
DB search
MASRSPDDETVQPPPKRPRQGPLADEDATPPPRVELNPADCDLDFDVGGGGLQGLALHEG
GFAYCWSGARATVGVRRGGRYRFGCRVVAEQPVEMDLTAADERHLCRIGVSRGDDPVGGL
GESDHSFGFGATGKFSHHRKFVDYGVRFRVGDTVVCAVDLDLKPMASIGFARNGEWLGVA
KHFDAGEKGLGLVDAPVRPMHWESALFPHVLLKNVVVDMQFSREDGLEPVVGYEPWASAC
ADGNAVFGPVFEQSECEVMMMVGLPASGKSTWAEKWVKDHPEKRFILLGTNLALEQMKVP
GLLRKNNYGERFDRLMDCATWIFNTLLKKAANIPRNYIIDQTNVYRNARIRKLRPFANYR
KTAVVVFPSPSELKLRTIKRSTEMGKEVPADAVNEMTANFVLPLSKDMPGSKEPFDEVIF
VELSRDESQRNLYEMQRVLPRAVTPSCGNSNNQNASSTYAGAVSLVDPRARSPMPGFRPP
MDNSYGSYCGTVPGSAATFGRGAHAPGNMTYQQAPWSIQSFQSPTGNQHQIHSGCPSAPN
QYQMHSSYPSNPNQYQVRASYESTPLPGYGHSTYGSHRGPSSYNPNPCNTEMHQSIQAPM
TGRNLFQTPGSAETYGGPGYAAANLTGRPLQVHPSTLPTYGSHPVDQRVPNQGSSSSWSY
DSYRHYGQHSHDVHRPQYAAPAPRLPHGATPNNLNPPPRPWYN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggtcgccggacgacgagaccgtgcagccacctccgaagcggccccgccaa
ggccccctcgcggacgaggacgccacaccgccgccgcgcgtggagctcaacccggcggac
tgcgacctcgacttcgacgtcggtgggggcgggctccagggcctcgcgctgcacgagggc
gggttcgcctactgctggtcgggcgcgcgcgcgacggtgggggtcaggcgcggcgggcgg
tatcgcttcgggtgccgggtcgtcgccgagcagcccgtggagatggacctcacggccgcc
gacgagcgccacctctgccgcatcggggtctcgcggggggacgaccccgtgggtggcctc
ggggagtccgaccacagcttcgggttcggggccacgggcaagttctcccaccaccgcaag
ttcgtcgactacggcgtgcggttcagggtcggggacacggtcgtctgtgccgtggatctc
gatttgaagcccatggcgtcgatcgggttcgcgaggaacggcgagtggcttggtgtcgcg
aagcatttcgatgcgggtgagaaagggcttggtctggttgacgctcctgtgaggccgatg
cattgggaatccgcactctttccccatgtcctgctgaagaatgtcgttgtcgacatgcaa
ttcagcagggaggatgggctggagcctgtcgttggttatgagccctgggcctcagcttgt
gctgatgggaatgcggtgtttggccctgtgtttgaacaaagtgaatgtgaggtcatgatg
atggtcggtctcccagcttcaggcaagtcgacatgggcagagaagtgggtcaaggatcat
ccagagaagcgctttatccttctcggaactaaccttgcattggagcaaatgaaggtgcca
gggttgttgcgtaagaataactatggtgagcgttttgatcgattgatggattgcgctaca
tggattttcaacacattgctgaaaaaggctgcaaacatccctcgcaattacatcatcgat
caaacaaatgtttacagaaatgctcgtattcgcaagctgaggccatttgccaactaccgc
aagactgctgtggtcgtgttcccatcgcctagtgaactgaaactccggacaataaagcga
tctactgagatgggaaaggaagtaccagctgatgcagttaacgagatgacagccaatttt
gtgttaccactttcaaaggacatgcctggttcgaaggagccttttgatgaggtaatcttt
gtggagctttctagggacgagtcccagagaaacctatatgagatgcaacgtgtgcttcca
agagccgtgactccaagctgtggcaattccaataaccaaaatgctagctctacatatgct
ggggctgtttctctggttgaccctagggcaaggtcacccatgccaggctttcgcccacca
atggacaactcatatggaagttattgtggcactgtacctggcagtgctgctactttcggc
agaggtgctcatgctccgggcaacatgacttatcaacaggcaccatggagcattcagagt
tttcagagtccaacaggaaaccaacatcaaatccattcaggctgtccaagcgctccgaac
caatatcagatgcactcaagctacccgagcaacccaaaccaatatcaagtccgtgcaagc
tatgaaagtaccccacttcctggatatggacacagtacatatggttctcataggggtcca
agctcgtacaatcctaatccttgtaacactgagatgcaccaaagtattcaggctccaatg
actggcaggaacctcttccagacacctgggtcagctgaaacctatggtgggcctggctat
gcagctgcaaatctcactggaaggccacttcaggtgcatccatcaactcttccaacgtat
ggttcacatccagttgatcagcgggtgccaaatcaaggtagttcttcctcatggagttat
gatagttacaggcactatggacagcattctcacgatgtgcaccgcccgcagtatgcagct
ccagctcccaggcttcctcacggtgctactccaaacaacttgaatccaccgccgaggcct
tggtacaactag
DBGET
integrated database retrieval system
