Phragmites australis (common reed): 133888210
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Entry
133888210 CDS
T10575
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133888210
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133888210
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
133888210
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
133888210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133888210
NCBI-ProteinID:
XP_062184346
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Position
13:complement(22049463..22054647)
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AA seq
627 aa
AA seq
DB search
MESLRRFLNPLVLNLQKMELELTCPVCLKLLSAPTMLPCYHTSCSKCATTPTTNGYSCAI
CKSAYRSQDLRPASHLEAIVSIHRRLSSTVSTMVQQQDTQVHIPVTKTASQGTPESGNRS
GVDKSDQMKSFNPFASKLVYNQSTGPAFGNMDGVQARDPAFENKAADAAVAPAVFVQGGS
SGSQSSDGPGDLDCDSNDLEGELIASRSPLQAALKREPNGMGGHTRELKRQKSIDQGERQ
PTMSGAWKCEFCHSFKITEFTGPLSHYLQGEPLEADQAWKSNVLHVHEKCIEWAPQAFFT
GDIANNLEPELARASKIKCSICGLKGAALGCLVKSCRKSYHVPCAHKISGCRWDEENFVM
LCPSHSSKKLPCERLKSKMKTKLQQPSSDMIHDNLNSPSPMQRDKIWTDSPFLTSEWVIC
GSALNGHEKEILDQFEHQTGITVTNNWRSDVTHVIANTDERGACARTLKVLMAILAGKWV
LSVNWLKACIEAREPVPEEPYEISSDVHGSFDGPRTGRLLTMQQAPSLFAGLTFYFSGHF
MPAYKVHLEDLIAAAGGSILEKTGLSSTSLIVYSMEPPQGSDPDTLNEAIKKRIAEAEEL
AATIGCKAIPHTWLLDSIASCTVQLTV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagagcctgaggaggttcctgaacccgctggtgctcaacctccagaagatggagctg
gagctcacctgccccgtctgcctgaagttgctcagcgcgcctacaatgctaccttgctac
cacacatcgtgcagcaagtgtgccactacaccgactacgaatggttacagctgtgccatc
tgcaaatcagcctatcgttctcaagatttaaggccggcctctcaccttgaggcaatagta
agcattcacaggaggctcagctctacagtcagcaccatggttcaacagcaggatactcaa
gttcacattcctgttacaaagacagcatctcaaggaacaccagaatcaggaaacagaagt
ggggtagacaaatctgaccagatgaaatctttcaacccctttgcttcaaagctagtatat
aaccaatcgactggacctgcatttgggaatatggatggtgttcaagcaagagatcctgct
tttgagaacaaagctgctgatgcagctgttgcgccagcagtttttgtacaaggaggatcc
tctgggtcacaatcttctgacggacctggggatttggattgtgacagcaatgaccttgaa
ggagaactgatagcaagcagatcacctcttcaagctgcattaaaaagggagccaaatgga
atgggtggccataccagagagttgaagaggcaaaaatccattgatcaaggagaaagacaa
ccaaccatgtctggtgcttggaaatgtgaattttgtcactctttcaaaatcactgagttt
actggccctttgtcgcattatttgcaaggggagccattagaggctgaccaagcttggaaa
tcaaatgttctgcatgtccatgagaaatgcattgaatgggctccccaagcattctttacc
ggtgatattgcaaacaacttggagcctgagttggcccgtgcttctaagatcaaatgtagt
atttgtggattgaaaggcgcagcccttggctgccttgtgaagagctgccgcaagagttat
catgtcccatgcgcccacaagatctcaggctgccgatgggatgaagaaaactttgttatg
ctgtgtccttctcattcatcaaaaaagttgccttgtgagagattgaaatcgaaaatgaag
accaagctgcagcaaccgtcttctgatatgatacatgataatctaaattcaccttctcca
atgcaaagggataaaatttggaccgactcaccttttctgactagtgaatgggtgatatgt
ggatcggccctcaatggtcatgaaaaggaaatcttggatcagtttgagcatcaaactggc
atcacagtaactaacaactggaggtcagatgtgacacatgtgattgctaatacggatgaa
cgtggggcatgtgctaggacactcaaggttctcatggccatattagctgggaaatgggtt
cttagtgtaaattggctgaaagcttgtattgaggctagagaaccagtcccagaagagccc
tatgagatcagttctgatgttcatggctcctttgatggccctcgcacaggaaggcttcta
acaatgcaacaggcaccaagtctgtttgctgggttgaccttctatttcagtggccatttc
atgccggcatacaaggttcaccttgaagatttgattgctgcagcaggggggtcaattttg
gagaagactgggctctctagcacgtccttaattgtttacagcatggagccaccacaagga
agcgatccagacacgcttaatgaggctatcaagaagagaatagctgaggctgaggaattg
gcagccaccattggctgcaaagctattcctcatacatggcttctggattctattgcatcc
tgcacagttcaattgactgtgtga
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