Phragmites australis (common reed): 133888277
Help
Entry
133888277 CDS
T10575
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
paua Phragmites australis (common reed)
Pathway
paua04148
Efferocytosis
Brite
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
133888277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133888277
NCBI-ProteinID:
XP_062184439
LinkDB
All DBs
Position
13:complement(30909777..30916489)
Genome browser
AA seq
975 aa
AA seq
DB search
MMSTAQRGHPPHENGAGGDGDDEREEEEDGDEGDEGEEEEDEVEVEEEPRLKYQRLGGSA
PAILSTDAAAAIAVADRMVALGTHNGTLHILDFQGNQVKEISVHTATINDISFDADGEYI
GSCSDDGTVAISSLFTDEKLKFEYHRPMKAIALDPNYSRNYRRFSTGGLAGQVLVLTKKT
WGGGYNKKVLRDGEGPIHSMKWRADLLAWANNAGVKVHDMKTDKGIAFIERPKGIPRPEF
LVPHLVWQDDTVLVIGWGTSVKIAAIRTDLSQGLNGIQRTITNEKYVDIVGSFQTGYHIS
GIAPFGDLLVVLAYIPDEDDRDKKFSTSVPSRQGTAQRPEIHLVSWKNDELTTDALPIHG
YEHYKAKDYVLAHVPFSGSSNAGGQWAAGDEPLYYIVSPKDVVVAKPRDAEDHIAWLLQH
GWHEKALAAVEAGQGRTELLDEVGSRYLDHLIIERKYSEAAQLCPKLLRGSPSAWERWVF
HFAHLRQLPVLVPYIPTENPQLSDTAYEVALVALTANPSFHELLLATVKNWPPTLYSASP
VISAIEPQLNSSSMTDPLKEALAELYVINSQYEKAFSLYAELLKPEVFVFIEKYNLHDAI
HDKVVNLMILDSKKTLYLLIQHRDIIPPYEVVEQLLHTSKNCDKKYLLHLYLHALFETDI
HAGKDFHDMQVELYVEYEPRMLLPFLRTSQHYRLDKAYEIFAQKERVKEQVFVLGRMGNA
KEALSTIINKLEDIQEAVEFVMEQHDDELWEELIRQCLQKPEMVGMLLEHTVGNLDPLYI
VSLVPDGLEIPRLRDRLVKIVTDYRTETSLRNGCNDILKVNSLWFTTLLFHPSENLSVCH
TCLLQADCVNLLVKYYHEARRGVYMASMDEEVHGNRVDDGSLRASERSSVRALDIKSRTR
CGARCCLCFDPLPIQDISAIVFYCCHAYHLSCLEGGLDLMRSNSNQDSDNGSDDADGSPS
GESRMRCVLCTTAAA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaccgcgcagcgcggccacccgccgcacgagaacggggcgggcggcgacggg
gacgacgagcgggaggaggaggaggacggcgatgagggcgatgagggggaggaggaggag
gacgaggtggaggtggaggaggagccgcggctcaagtaccagcggctgggcgggagcgcc
cctgcgatcctctccaccgacgccgccgcggccattgccgtcgccgaccgcatggtcgcc
ctcggcacccacaacggcaccctccacatcctcgacttccaaggcaatcaggtgaaggaa
atttctgttcacacagcaactattaatgacatcagttttgatgcggacggtgaatatata
ggcagttgctcagatgatggcacagtagcaataagcagcctcttcactgatgaaaaactg
aagtttgagtaccatcgtcccatgaaagcaattgctttagaccctaattattcccggaac
tataggagattttctactggtggtttagcaggtcaagtacttgttctgacaaagaagact
tggggaggaggctacaataaaaaggttttgcgtgatggtgagggaccaatccattctatg
aagtggagggcagaccttcttgcttgggctaataatgcaggggtgaaggtgcatgatatg
aaaacagacaaagggattgcattcatagagcgacctaaaggaattcctcggccagagttt
ttagttccccacttagtctggcaggatgatacagtcttagttattggatggggaacaagc
gtcaagattgcagcgattcgaacagatttatctcagggactcaatggcatacaaaggact
atcaccaatgagaagtatgtggatattgtgggttcgttccaaacaggctaccacatatct
ggaattgctccatttggcgaccttttagttgtgcttgcctatattcctgacgaggatgac
agagacaaaaagtttagtacctctgttccttcacgccagggaaccgcacagcgtccagaa
atacatcttgtatcatggaaaaatgatgaacttactacagatgctttgcctattcatggt
tatgagcactataaggcaaaggattacgttcttgctcatgtacctttctcaggaagtagc
aatgcaggtggacagtgggcggctggtgacgaacctttgtattacattgtgtctcctaag
gatgtagtggttgcaaaaccaagagatgctgaagatcatattgcttggcttcttcaacat
ggttggcatgaaaaagcgttggctgcagttgaggcaggacaaggacggactgagcttctt
gacgaggtgggttcaagataccttgatcacttgataattgaaagaaaatattctgaagct
gctcaactctgtccaaagttgctgcgaggatctccttcggcatgggagaggtgggtcttt
cactttgctcatctccgccaacttcctgttttagtcccttatatacctacagaaaatccc
cagctgagtgatactgcctatgaggtcgcccttgtagctcttactgccaatccttctttc
catgaacttctcttggctacagtaaaaaattggccgcctacattatactctgcttcaccg
gtcatttctgccattgagccacagttgaactcctcatcgatgactgatccattgaaagag
gcattagctgaattatatgtgatcaatagtcaatatgaaaaggcattttctctctatgct
gaactcctgaagccagaagtatttgtatttattgagaagtacaacttgcatgatgcaatt
catgataaggttgtcaatcttatgatactggatagtaaaaaaacactttacctattgatc
caacatcgtgatatcattcccccatatgaagttgtggagcagttgttgcataccagtaaa
aactgtgacaagaaatatttgttgcatttatatttacatgctctgtttgagacagacata
catgccggaaaagactttcatgatatgcaggtggagctctatgtagaatacgagccaagg
atgctattacccttcctccgtaccagtcagcactacaggcttgacaaggcatatgaaatt
tttgctcaaaaagaacgtgtaaaggagcaagttttcgtccttggtcgaatgggcaatgct
aaggaagctctatctacaattataaacaaactggaagatatacaggaggctgttgagttt
gttatggagcaacatgatgatgaattatgggaggaactgattagacagtgcctccagaag
cctgaaatggttgggatgctactggaacatactgtcggcaatcttgaccctctgtacatt
gttagtttggttcctgatggactagaaatacctcggttgcgggaccgccttgtgaaaatt
gtgacggactaccggacagaaacttcactgcgtaatggatgcaatgatatacttaaggtt
aactccctttggtttactaccctgctctttcacccatctgaaaatctgagcgtttgccat
acttgccttctacaggctgactgtgttaaccttttggttaaatactaccatgaagctcgg
cgtggggtctacatggcaagcatggacgaggaggtacatggaaacagagttgatgatgga
tctttgcgagcaagtgagagatcaagtgtacgggctctagatatcaagtccagaacgaga
tgtggtgcccgatgttgcttgtgcttcgatcctttgcctatccaggacatctctgccatt
gtgttctactgctgccatgcgtatcatctgtcttgccttgaaggtgggctagacttgatg
agatcaaacagtaatcaagatagcgacaatggctcggacgatgctgatggttccccgtca
ggcgagtcacgtatgcgctgtgtattgtgcactactgccgctgcataa
DBGET
integrated database retrieval system
