Phragmites australis (common reed): 133888300
Help
Entry
133888300 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133888300
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133888300
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
133888300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-RING_6
APG6_N
UPF0242
RING_XB3-XBAT31
zf-rbx1
HAUS1
Prok-RING_4
HrpB7
Motif
Other DBs
NCBI-GeneID:
133888300
NCBI-ProteinID:
XP_062184470
LinkDB
All DBs
Position
13:complement(24326718..24335495)
Genome browser
AA seq
880 aa
AA seq
DB search
MGSTGEPDRKRRFSSSVAPGGAPVAPAKRPPPAPPSEDKKLDFAVLKYKNQKLAEQLEVH
KFEFRALESKFNDLKLKQRTHNETLVLVKSSWERLVADLELISFCKSGSPHSDGRSNVRK
DGACMPTENDFLRRLVEAGATESSGCAPRCHLGNDVPPEQSSTVNVLRNIFRPSSDLWHA
NKEFATTALTKLPENEHSRQLQGATSDLLSKFERVVQEVDNLHLKHRQLASNYQNQRDSS
AWSRAEQKRLKEEWASTVAKLEESKHKLAALKAQADNKQGTPILFPALGNKNAAEDKVRD
KQRELQDLEATHKELTELISKRLEEIKRLHEERIEILNKLATFQNILTDFKSIRSSRAFQ
LVNDQLQKSQAELDHYQTLLEKLQVDKDSFVWQERQFNLKVDLAEIPQKVSAYCESRIAD
LEKDVQKLCDEKNMLVMKLEEASREPGRNQVISEFKALVSSLPREMDAMQSELSTHKDAS
LELHSLRAEVHSLSSILTRKEHEITELSCRSARAVSDISQLQSVVRDLRENMQELKLFME
LYKHESTDSREVMESRDSEFSEWARVHILRSSLDESKLEQRVMAANEAEAMSQQRLATAE
AEIAELGQKLETSRRDLVRLSDVLKSKHEECEAYLLEIESIGQAYEDIQTQNQQLLQQII
ERDDHNTKLFMEGVRAKKSHDALHLEVCSLHRDLQQASSLMDIYNQKIVRLEDQLRVWSE
RARRLAEDGWQQSVSLGNSQRKLAGMHGEAPKLRQSMEEIQANVGSNRLEVAKLLIELEK
ERFSKKRIEDDLELMSSKASSLRAKADESVVLEKLRHEVREYRGILKCGICHDRQKEVVI
AKCYHLFCNQCIQKSLGNRQKRCPSCGLSFGVNDVKPIYI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacgggggagccggaccggaagcggcgtttctccagctccgtcgcgcccggt
ggcgcccctgttgctcccgccaagcggccgccaccagctccaccctccgaagataagaag
cttgattttgctgtacttaaatacaaaaatcaaaagctcgcggaacaacttgaagtccac
aagtttgagttccgtgctctcgagagtaaattcaatgatttaaaactgaagcagaggaca
cataatgagacacttgtcctggtcaaaagttcttgggagcgacttgtagcagatctcgag
ttaatttctttttgcaaaagtggatctccacattctgacgggcgcagcaatgtaagaaag
gatggtgcatgcatgcccacagaaaatgattttttgagaagacttgttgaggctggtgct
accgaaagttctggttgtgctcccagatgccatttgggaaatgatgtccctccagaacaa
tcatcaacagtcaatgttctgcggaacatcttccgtccatcaagtgatctgtggcatgca
aataaggagtttgctacgactgctcttactaagttaccagaaaatgaacacagcaggcaa
ctgcagggtgccaccagcgacttgttgtccaagtttgaaagggtggtacaagaagtagat
aatcttcacttgaagcacaggcagttagcatctaactatcaaaaccaaagagattcaagt
gcctggagcagagcagaacagaaacgtctgaaagaggagtgggccagtactgttgccaag
ttggaagaaagcaagcacaaactggcagcactgaaagcacaggcagacaataagcaaggg
actccaatccttttccctgcactgggcaacaaaaatgcagctgaagataaggtcagggat
aaacagagagaattgcaagatcttgaagccacccacaaggaattaacggaattgatttca
aagcgcctggaggaaataaagagactgcatgaagagcgaattgaaattttgaacaagtta
gcgacttttcagaatatattgacagatttcaaaagcattcgttcttccagagcttttcag
cttgttaacgaccaacttcagaagtcacaagcagaattggatcactaccaaacattatta
gagaaattacaggttgataaggatagctttgtttggcaagaaaggcaatttaatctaaag
gttgatctggctgaaattccccagaaggtatctgcatactgtgaatctaggattgctgat
cttgaaaaagatgtgcagaaactatgcgatgaaaagaatatgctggtgatgaaacttgaa
gaggcttcaagagaacctggtcggaaccaggttatctcagaatttaaagctctggtgtca
tcactgcctagggaaatggatgccatgcaaagcgaactgtccacacacaaggatgcttcc
ttggagttgcattctttgcgagcagaggttcattcactttctagtatcctgaccagaaag
gaacatgaaattacagaattgtcatgtagatctgcccgtgctgtatccgatataagccaa
cttcagtctgtggttcgcgatttaagggaaaatatgcaggagcttaagctatttatggaa
ttatataagcatgagtccactgattccagagaggtgatggaatcgagagacagtgaattc
tctgaatgggctcgagtccacatccttagatcttctcttgatgaaagtaaactagagcag
cgcgtaatggcagccaatgaagctgaagcaatgtcacagcagagactagcaactgctgaa
gctgagattgctgaattaggtcagaagctggagacttctagaagggatctagttagacta
tctgatgttctgaagtctaaacatgaagaatgtgaagcttacttgctggagattgagagt
attgggcaagcatatgaagacatacagacacaaaatcaacaattgctacagcagatcatt
gaaagagatgatcataataccaagcttttcatggagggtgtcagagcaaaaaagtcacat
gatgctttgcatttggaagtgtgctccttgcacagggatttgcagcaggcaagcagtttg
atggatatatacaaccagaaaattgttcgcttagaggaccagctaagagtttggtcagag
cgggccaggagattggcagaggatggatggcagcaatctgtttcgttgggcaattctcag
agaaagctggcgggtatgcatggagaggctccaaagctcaggcagtcaatggaggaaata
caagcgaatgttggaagcaaccgtctggaagttgccaaactgcttattgaattagaaaag
gagaggtttagtaagaagagaatagaggacgatttggaactgatgtcaagtaaagctagc
tctcttagagctaaggcagatgaatcagtagtcctggaaaagcttcgccatgaggtcagg
gagtatagggggatattgaagtgtggtatctgtcatgatagacagaaagaggttgtgatt
gccaaatgctaccatctcttctgtaatcagtgcatacaaaagtctcttggtaaccgtcag
aagcggtgtccatcttgtggactaagcttcggggttaatgatgtgaaacctatctatata
tga
DBGET
integrated database retrieval system
