Phragmites australis (common reed): 133888502
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Entry
133888502 CDS
T10575
Name
(RefSeq) protein argonaute 2-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133888502
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133888502
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133888502
microRNA pathway
RISC loading complex
133888502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133888502
NCBI-ProteinID:
XP_062184758
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All DBs
Position
13:28004366..28010661
Genome browser
AA seq
1098 aa
AA seq
DB search
MDYERGGGGRGRGSGRGGGDRGGGGYGRHGGGGGGGYGPRGGEYGGGGGGYGPRGGEYGG
GGGGGYGHDAGGESGGGSYRPRGGGGYHGPRGGGGYHGPRGGGGGGGYGAGGRGGRGPGG
GGEQAHVSGGGRGGNAWAPSGRGRGGGPAEYVPVRAPAQATAPRGIASVETASSSGSVVS
SGGRGGNAWAPSGRGRGGGPVELAPVRAPAQATAARGNTTEEATSLSGSVEHIVSSELAR
VEPLASSSVATSAVGLRVAMQRPDGGGSSFQAKVRLLVNHFTVSYREASTIFHYDINIKL
DQASPKASGKELSKAEFLSAKDELFKDNSFRRFSSYVAYDGGRNLFTSAELPEGLFHVRV
RSRTYIVSVEFRKQLPLSQLSELPVPREVLQGLDVIVREASRWRKIILGKGFYSPDSSQE
IGWGVVALKGTQQTLKHTQQGLILCVDYSVMPFYQAGPVLDLVQKFEKSLDYRTTLKKWQ
LENLEYELKGRRVTVIHRRTNQRYTVQCLTKLPASQITFVDAESGQTKRLVDYYAQQYGK
VIEYQMLPCLDLSKNKDRPNYVPIELCTLLEGQKYPKANLDKNSDRALKDKALIPAFKRK
EEILNLVKARDGPCRGEIAQQFGISLDVKMTEVMGRILPAPNLRLGASNGKTCKFSIDQE
KCQWNLLKNRLVDGRDLQCWGIVDFSAWPSDWRTLNRNMFIEKIVRKCCDLGIRMNSKPC
FEHVSEMAVFSNPHRLYEELNKAKEVAATKKQRLQLLFCPMSEQHPGYKTLKLICETQLG
ILTQCFLSPLVNKPQGQDQYMTNLALKINGKLGGSNAQLFDELPRVGGVPFMFIGADVNH
PSPGNVESPSIAAVVASIDYPGASKYVPRIRAQPHRCEVIKHLGEMCQELIGVYEKQNGV
KPQKIIYFRDGVSDGQFEMVLNEELSDMEKAIKENGYAPTITVIVAKKRHHTRLFPKDRS
ELQTRNGNVPPGTVVDTGVVDPSAYDFYLCSHNGLIGTSRPTHYYSLVDEHGFGSDDLQK
LVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYEGMMASQPQRSGSSSGSSSGGAFE
VGTFPRLHKDLENNMFFI
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggactacgagcgcggcggcggggggcgtggccgcgggagtggtcgcggcggcggcgac
cgtggcggaggtggctacgggcgccacggaggaggcggcggcggcggctacgggcctcgc
ggaggcgagtatggcggcggaggagggggctacgggcctcgcggaggcgagtacggcggc
ggcggaggagggggctacgggcatgatgcaggcggtgagagcggaggaggaagctacagg
cctcgtggaggtggaggctaccacggacctcgcggaggtggaggttaccacgggcctcgc
ggaggcggaggcggaggaggctatggcgcgggcgggcgcggtggccgtggccctggcggt
ggcggtgaacaagcgcacgtgtcgggcggtgggcgtggcgggaacgcgtgggcgccgtcc
gggagaggtcgcggaggcggtcctgcggagtacgtcccggtgagggcgcctgcgcaggct
accgcgccgagggggattgcgtccgtggagacggcgagctcgtcaggatccgtcgtgtca
agcggtggccgtggcgggaacgcatgggcgccgtcggggagaggtcgcggaggcggccct
gtggaactcgccccggtgagggcgcctgcgcaggctaccgcggcgagggggaacacgacc
gaggaggcgacgagcttgtcgggatccgtcgaacacattgtatccagtgaattggccaga
gtagagccattagcatcgtcatcagttgccacatctgctgttggcttacgagtggcaatg
caaagacctgatggtggaggctcatcatttcaggccaaggtcaggcttttggtgaaccac
ttcactgtcagctaccgagaggcatcaaccatctttcactacgacataaacatcaagctt
gatcaagcttctcctaaggcttcaggcaaagagctctccaaggcagaatttctatctgcc
aaggatgagctcttcaaggacaacagctttcggcggttttcttcgtatgttgcttatgac
ggcggaagaaatctatttacttctgctgaactgcctgaaggtttatttcatgtgagagtc
cggtcacggacctatattgtatcggtggagttcaggaagcagctgccgttaagccaactt
tcagagttacctgtgcctagagaggtcttgcagggtcttgatgtcattgtacgtgaggcc
tctcgctggcgcaagattatccttggtaagggattttactcaccagatagcagtcaagag
attgggtggggtgttgtggctctgaaagggacccagcagacccttaaacacactcagcaa
gggctgatcctatgcgtggactattcagttatgccattttaccaagctggaccggtgctg
gatcttgttcagaaatttgagaagtcccttgattacaggacaacactgaagaagtggcaa
ctggaaaatttggagtatgagcttaaaggacggcgtgttactgtgattcacaggaggact
aatcagaggtacactgttcaatgtttgacaaaattgcctgccagccagatcacctttgtg
gatgctgagtcagggcaaacaaagaggcttgtcgattactatgcccaacagtatggcaag
gtgattgagtatcagatgcttccatgcttggatttgagcaagaacaaggacagaccgaat
tatgtgccaattgagctttgcactcttcttgaagggcagaagtatccaaaggcaaacttg
gataagaattccgatagagcactgaaagataaggccctaatccctgcatttaagcgtaag
gaggaaattctgaacttggtgaaagctagagatggaccttgcaggggggaaatagcccag
caatttgggatttctttggatgttaaaatgacagaagtcatgggtaggatccttcctgca
cccaacctaagactcggcgcctccaatggcaagacgtgtaaattcagtattgatcaggaa
aagtgccaatggaaccttttgaagaacagactagtagacggccgggatcttcagtgctgg
ggcatcgtcgacttcagtgcatggccgtctgactggcgaaccctcaacagaaacatgttt
attgaaaagatcgtgaggaaatgctgtgacctcggcatccggatgaactccaaaccatgc
tttgagcacgtatcagaaatggcagtgttctccaatccacatcgactgtacgaggagctt
aataaagcaaaggaggttgcagcgacaaagaagcagaggctgcagctcctcttctgcccg
atgtctgagcagcatccaggatacaagacactgaagctgatctgcgagacgcagctgggg
atcctgacccagtgtttcctgagccccctcgtgaacaagccacagggccaggaccagtac
atgaccaaccttgctctcaagatcaatggaaagcttgggggcagcaacgcacagctgttc
gacgagctcccacgggtcggcggcgtgcctttcatgttcatcggtgctgacgtgaaccac
ccgtcgcccgggaacgtggagagcccgtcgatagcagccgtggtcgcgtccatcgattac
cctggcgccagtaagtacgtgccaagaatccgcgcccagccgcaccgctgcgaggtgatc
aagcacctcggtgagatgtgccaagagttaatcggcgtctacgagaagcagaacggcgtg
aagccgcagaagatcatctacttccgcgacggggtgagcgacgggcagttcgagatggtc
ctcaacgaggagctgtcggacatggagaaggcgatcaaggagaacgggtacgcgccgacg
atcaccgtgatcgtggccaagaagcgccaccacacgcgcctgttccctaaggacaggagt
gagctgcagaccaggaacggcaacgtgccgcccggcacggtggtggacaccggcgtggtc
gacccgtcggcgtacgacttctacctgtgcagccacaacgggctgattgggacgagccgg
ccgacgcattactacagcctggtggacgagcacgggttcgggtcggacgacctgcagaaa
ctggtgtacaacctgtgcttcgtcttcgcgcggtgcaccaagccggtgtcgctggcgacg
cccgtgtactacgctgacctcgctgcgtaccgcggcaggctctactacgagggaatgatg
gcgtcccagccccagaggagcgggtcgtcgtcgggatcgtcctccgggggggcttttgaa
gtcgggaccttcccgaggctgcacaaggatctggagaacaacatgttcttcatctga
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