Phragmites australis (common reed): 133888515
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Entry
133888515 CDS
T10575
Name
(RefSeq) protein TRANSPARENT TESTA 9-like isoform X1
KO
K19513
protein CLEC16A
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133888515
03029 Mitochondrial biogenesis [BR:
paua03029
]
133888515
Membrane trafficking [BR:
paua04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
133888515
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
133888515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
Motif
Other DBs
NCBI-GeneID:
133888515
NCBI-ProteinID:
XP_062184774
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All DBs
Position
13:10658528..10682007
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AA seq
783 aa
AA seq
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MIYGDQHDPSFFEFFMEKQIMGEFARILRISKLSRVSLQLLQTMGIMIQNLRNEHSIYYI
FSNEHINFLITYPFDFRIDEMLSYYISFLRAISGKLNKNTVSLLVKTKNDEITSFPLYVE
ALKFAFHEDSMIQVAIRTLTLNVYHVGDESVNRFVSRVLLSDYFSDMIQHFQKQCIDLDK
LVVRSSRNANSSPPMASVEDAIVQIEDTLYYFSDVMSSGIPDLERFITENILQVLVFRLL
LPSLQRQSTDLGISVTTSMYLLCCILHIFKNKDMASTVATALFHQPDCADSKQETPNGCN
SEHDNCISENRCSSASAVEQSDEDKPNRQCLPEHSSPSDCCQGNTPREYLLSYITCGDDS
QALGSLCLFATLLQTKELDESMLDALGILPQRKQHKKLLLQALVGEDLAERRLFSSSSGL
TDDSICSDFDIYVRKLQDKYGLQCHHPRQMTPKVHIYQVLDALVSLFCRSNVSADVRLVG
GWLFRQLLPHGEDEFTAFHLRRLKDSHKDCSAKLSDESGGCWCDVLLPIVKEAWRNCKKA
IEASSPPKESKSIIVPLDLSSFGGDSSIAIAEKIYELIKYFVLQHQVILFCLGETFTDQP
PIYSPTDLPLNTRASAADFDGSVPKPGLEINLVDAVPCRIAFERGKERHFCFLAISKGTS
GWILLLEELPLKQERGIVRVIAPLAGSDPRIDEKHAKWLHLRIRPSSVPFLDTEKYKGKT
KKYLVDGRWTLAFSDEQSCKAAEAMVIEEMKLQKDAIGKQLKPLVEFDMPEDGLHETHSD
DGS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatatatggtgaccagcatgatccctctttttttgaattttttatggagaaacagatc
atgggtgaatttgctcgtatattgaggatttctaagttgtcaagagtgtcactccagttg
ctacagacaatgggtatcatgatccaaaatttaagaaatgaacattcaatttactatatt
tttagcaatgagcacatcaacttcttgataacataccctttcgattttcgaattgatgag
atgctttcgtactacatatcctttctacgggcaataagtgggaagttgaacaagaatacg
gtttctttgcttgtgaagacgaaaaatgatgagatcacttcctttcctctttacgttgag
gccttaaagtttgcttttcacgaggatagcatgattcaagttgcgatacgtaccttgaca
ctcaatgtctatcatgttggagatgaatctgttaacagatttgtttcccgtgtgctgctg
tccgattatttttcagacatgatccagcattttcagaagcagtgcattgacttggataag
ttggttgtgcgttcttcacgaaatgcaaattcttctccgccaatggcctctgttgaagat
gcgattgtgcaaattgaagatacactgtattatttcagtgatgttatgtcttctggtatt
cctgaccttgaaaggttcatcactgaaaatatcttacaagttttggtatttcgactctta
ctcccatcattgcagaggcagagcacagatttgggcataagcgtcactacttccatgtat
ttgctttgctgtatactccacatttttaagaacaaagatatggcaagtactgtagctact
gctctttttcatcaacctgattgcgctgatagtaagcaagagacacctaatggttgtaac
tctgagcatgataattgcatatctgagaatcggtgcagcagtgcttctgctgttgagcaa
tcagatgaggacaagccgaataggcaatgcttgccagagcattcgtcgccaagtgattgc
tgccaaggtaacacaccgagggaatacttgctgtcctatatcacatgcggagatgattca
caagctttgggttcattgtgcttatttgctacattgttgcagacgaaagaacttgatgag
tcaatgctggatgcacttggaatacttcctcaaagaaagcagcataagaagcttctgtta
caagctttagtaggtgaagaccttgctgaaagacggttattttcatccagtagcggtctc
actgatgatagcatttgcagtgattttgatatttatgtaaggaagcttcaggataaatat
gggctacaatgtcatcatccacgacaaatgactcccaaagttcacatataccaggtgctc
gatgcgttagtctcccttttctgcagatcaaatgtatctgcagatgttcgcttggttggt
ggctggcttttccggcaactgctgccccacggagaggatgaattcactgcttttcatcta
agacggttaaaggattcacacaaggattgcagtgcaaagctttcggatgaatctggagga
tgctggtgcgacgtgcttcttcctattgttaaagaggcttggaggaattgcaagaaagca
attgaggcatcttcaccaccaaaagaatccaagtctattattgtacccttggatttgagt
tcatttggaggtgactcttccattgctatcgcagagaaaatatatgagttgattaagtat
tttgtgctacaacatcaagttatactcttctgccttggagaaactttcactgatcagcct
cctatttactctccaacggacttgcctttaaataccagagcaagtgctgcagattttgat
ggttcggtgcccaagcctgggcttgaaatcaacttagttgatgcggttccttgtcgaata
gcgtttgaaaggggcaaagaacgtcacttctgctttttagccatatctaaaggaacttct
gggtggattcttcttctagaagaattacctctcaagcaagaacgtggaattgtacgcgtc
attgctcctttggctggatctgatccaagaatagacgaaaagcatgcaaagtggttgcat
ttacgcattcgtccttcttcagttccctttttggatactgaaaaatataaagggaagaca
aagaagtatcttgttgatggtagatggacccttgcttttagtgatgagcaatcttgtaag
gcagcagaggctatggttatcgaagagatgaagctccagaaagatgctattggaaaacaa
ttgaagccattggttgaatttgacatgcctgaagatggattgcatgaaacccattctgat
gatggatcatga
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