KEGG   Phragmites australis (common reed): 133888556
Entry
133888556         CDS       T10575                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:paua03016]
    133888556
Enzymes [BR:paua01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     133888556
Transfer RNA biogenesis [BR:paua03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    133888556
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 DEAD_2 zf-CCCH_PARP12 RPEL zf-CCCH_2
Other DBs
NCBI-GeneID: 133888556
NCBI-ProteinID: XP_062184824
LinkDB
Position
13:1973536..1980236
AA seq 690 aa
MAAPAPATGLPDSSPAVTAEASPPPRPTPEELVARAIAPVKTAFLRPPPVREAPKEEGKV
GGSGVAGVAGEKKSKRQLKRERKQEQKSTSHLCIEVGKSGNVDSCKYGASCRFSHDITAY
LAQKPADLEGTCPFAVSEKLCPYGLTCRFFGTHKDSLAPENRPEGNREINTLNKDIQKLL
WKSSYKFPKASAQIKLLGLKDVNKNKAKAANDEHRVDHDNPGESCKLNGNDKTETLCSIP
ASVELDSTSCKEIDNSEGEPLVVNSVPCVEPRPLKKSKVEVDETQNHEAGIHNIEAESED
LDLSNGLEVPSNNQSSCRVDLISTPHSREKKIIDFREKLYLAPLTTVGNLPFRRLCKTMG
ADITCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGPYPDTVARTVELVDNECSVD
FIDINMGCPIDIVVNKGAGSSLLTKPMRIKSIVQAASAVTEKPLTVKVRTAFFEGRNRAD
SIVSDIYDWGASAITIHGRSRQQRYSKLADWDYIYQCAQKAPDYLHVIGNGDVFSFTDWN
KHVSGCSKISTCMIARGALIKPWIFTEIKEQKHWDITSGERLNILKDFVRFGLEHWGSDS
KGVETTRYFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPSYHGRDDLETLMASDSAADWIR
ISEMLLGKVPEGFIFAPKHKSNAYDRAENG
NT seq 2073 nt   +upstreamnt  +downstreamnt
atggccgcgcccgcgccggccaccggcctgccggactcctcccccgccgtcacagccgag
gcttcccctcctccacggcccaccccagaggagctggtggcccgcgccatcgcccccgtc
aagaccgccttcctccgcccgcctccggtccgtgaggcccccaaggaggagggcaaggtc
ggcggcagcggcgtggccggcgtcgcgggggagaagaagtccaagcgccagctcaagcgc
gagcgcaaacaggaacaaaaatctacttctcatctttgtattgaagtagggaaaagtgga
aatgtggactcttgcaaatacggtgcttcttgtcgtttcagccatgacataactgcttat
ttggctcagaaaccagctgaccttgaaggaacatgcccatttgccgtttcggagaagttg
tgtccgtatggactaacttgtcgattttttggtacacataaggatagcctagctcctgaa
aatcgtccagagggaaaccgtgagataaatactttgaacaaagatattcaaaaactctta
tggaagagcagttacaaatttcccaaggccagtgcccagattaaacttcttggtctcaag
gatgtcaacaagaataaagcaaaagcagcaaatgatgaacatagggtagatcatgataat
ccaggtgaatcatgcaagctaaatggcaatgacaaaactgaaactctttgcagtattcct
gcgagtgttgaacttgattctacttcgtgcaaagaaatagataattcagagggtgaacca
ttggttgttaactcagttccatgtgttgagccaagaccgttaaaaaaatctaaggttgaa
gttgatgaaactcagaaccatgaagctggtattcataacattgaggcagaatctgaagat
cttgatttaagcaatggattagaagtgccctcaaataatcaaagttcttgcagggttgac
ctaatttcaacacctcattcacgcgaaaagaaaattatagatttccgagagaagctgtac
cttgctcccttgaccactgttgggaatcttccttttcggaggctctgcaaaaccatggga
gctgatattacttgtggagaaatggctatgtgcacaaatcttttacagggtcaagcttcg
gagtgggctttgctacgacgacattcatcagaggatttgtttggagtgcaaatatgtgga
ccctatccagatacagtagcacgaacagttgaacttgtggataacgaatgttcagttgac
ttcatagacataaatatgggctgcccaattgatatagttgttaacaagggtgctggatca
tcattgctcacaaagcctatgaggattaagagtattgtgcaagcagcatctgctgttact
gaaaaacctttaactgttaaggtaagaacagctttctttgagggcaggaaccgtgctgat
tctatagtttcagacatctatgactggggtgcttcagctataacaatacatggtcgttca
cggcaacaacgctacagcaaactcgctgattgggactatatttaccagtgtgcacagaag
gctcctgactacttgcacgtcattggaaatggtgatgtattctcctttactgactggaac
aagcatgtctcaggctgctccaaaatttccacttgcatgattgctcgaggtgcacttatc
aagccttggatatttactgagataaaagaacaaaagcactgggatattacatctggcgag
agattaaacattcttaaagattttgtgcgttttggtcttgaacattggggctctgattcc
aaaggtgtggagacaacacgctatttcttactagaatggctaagttatacctgccgctac
atcccggttggcctgttggatgtcatcccacaacgattgaactggaggcctccaagctac
cacgggcgtgatgaccttgaaaccctgatggcctctgattcagcagctgactggataagg
atctctgagatgttgcttggcaaagttccagaaggatttatctttgcaccaaagcacaag
tcaaacgcttacgatcgggcagaaaatggttaa

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