Phragmites australis (common reed): 133888566
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Entry
133888566 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133888566
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133888566
09123 Folding, sorting and degradation
03018 RNA degradation
133888566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133888566
03041 Spliceosome [BR:
paua03041
]
133888566
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133888566
mRNA degradation factors
5'-3' decay
Lsm complex
133888566
Spliceosome [BR:
paua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
133888566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
133888566
NCBI-ProteinID:
XP_062184841
LinkDB
All DBs
Position
13:complement(14220329..14224595)
Genome browser
AA seq
86 aa
AA seq
DB search
MSSGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKN
KYGDAFIRGNNVLYISTTKRTHTDGA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcggcgcggtgaagacgccatcggacttcctcaagtcgatcaggggccgc
cccgtcgtcgtcaagctcaactccggcgtcgattacagaggtattttggcttgtctggac
ggatacatgaatattgctatggagcaaactgaagagtatgttaatgggcaactgaagaat
aaatatggtgatgcgttcattagaggcaacaatgttttatacatcagcaccacgaagagg
acccatactgatggcgcataa
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