Phragmites australis (common reed): 133888902
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Entry
133888902 CDS
T10575
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133888902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133888902
03032 DNA replication proteins [BR:
paua03032
]
133888902
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
Sm proteins
133888902
U2 snRNP components
133888902
Complex B
U1 snRNP components
133888902
U4/U6.U5 tri-snRNP components
133888902
Complex C
U2 snRNP components
133888902
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133888902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
BPL_C
Motif
Other DBs
NCBI-GeneID:
133888902
NCBI-ProteinID:
XP_062185275
LinkDB
All DBs
Position
13:complement(19934526..19936700)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggttcttaatgaaactgaacaacgagacggtcactatcgagctcaag
aatggcacggtcgtccacggcaccatcaccggtgttgacataagcatgaatactcatcta
aagacagtgaagcttacattgaaagggaagaatcctgtgacccttgaccacctcagtgtg
cgaggaaacaatattcgctattacattcttccagacagcttaaacctggaaacgttgctg
gtagaggagacccctagggtcaagcctaagaagccaactgcaggaaagcctttggggcgt
ggtcgcggccgtggacgtggacggggtcggggccggggtcgctga
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