Phragmites australis (common reed): 133888935
Help
Entry
133888935 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133888935
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133888935
04121 Ubiquitin system [BR:
paua04121
]
133888935
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133888935
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133888935
Membrane trafficking [BR:
paua04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
133888935
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133888935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
133888935
NCBI-ProteinID:
XP_062185317
LinkDB
All DBs
Position
13:17422809..17427763
Genome browser
AA seq
544 aa
AA seq
DB search
MGKFMHGQPLISHSGVSRHHYSLAAVAVGLGIGVAGLCKVLHSGLAIPWVSPRKFFSGTQ
EVYYVGGLRNLGNNCFLNVILQALASCDCFVSFLDNLIGTDDLLPEEKTERMPLIFALSS
LLEELSIVRDERVVLNPQGVMHALSLYVSHFNLTRQQDASEAFLHLLISLRDEFSCCYVP
HSSLADITLSHSKVYNQREGNQPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFENF
HCLPLSPVLNTNGDIISGCSLVDCLKYFTVVEHLDNYRCDRCWHIAAAKYLSHKSEVDEE
KVDKLHNCVDYGTCSCRHMFSPGEILCSASSQGTKQLIISQCPKILCIHLLRASVSLDGE
PVKHQGHISFPLLLNLSPFAGGTLSTGQGFGPLAMNAHRDGQQALHLYRQLNMRMPLNVL
PTGGNLSSQPCKEEGTNNSGGSIYVGNIHVANSSSSSSPPLPLPSSSRSKLYGLSAVVEH
YGKCGGGHYAVYKGITSNSNANDPGRPPAGLGKRWFYISDGHVSQVSEDDVLGAEATLLF
YERL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatttatgcatggacagccactgatatctcatagtggtgtaagtcgacatcac
tatagtcttgcagctgttgctgttggcttgggaataggagttgctgggttatgcaaggta
ctgcatagcggtttggccataccatgggtttctccgaggaagttcttttcggggacacag
gaagtttactacgttggaggtctacgaaatcttggcaacaattgctttcttaatgttatc
ctgcaggcacttgctagctgtgattgttttgtttcctttctagataatttgatcgggact
gatgacttgctacctgaggaaaagactgaaagaatgcctcttatctttgctctaagttcc
ctattggaagagttgagcatagtgcgagatgaaagagttgtattgaatccacaaggagta
atgcatgctctgagtttatatgttagtcacttcaatttgaccagacagcaggatgcttcc
gaagcttttcttcatcttctgatctcactgagggatgaattttcctgttgttatgtacca
catagttctctggcagacatcaccctgtctcactccaaagtatacaatcaaagggaaggt
aaccagcctgaatgcaagcgctggaaacaaaatctatttggcccctttgatgggactatt
ggcagcatcttgtcttgcagaaattgctcgtctgtgctgtcattggactttgagaatttt
cactgcttgcctctctcaccagtgcttaatacaaatggagatattatcagtgggtgtagt
ttggtggattgcctgaagtacttcactgtggtggagcatcttgacaattatcgctgtgat
cggtgttggcatattgctgctgccaaatatctatcgcataaatcagaagttgatgaggaa
aaagttgacaaacttcacaactgtgtcgactatggcacttgcagttgcaggcatatgttt
tccccaggggaaatattatgttcggcatcttcacaaggaacgaagcagttgattatcagt
cagtgcccgaagattttgtgcattcatttgctacgtgcttcagtcagtcttgatggtgaa
cccgtcaagcatcaggggcatatttcttttcctttacttctcaatctatccccatttgcg
gggggtacattgagcactggacaaggatttggacctttggcaatgaacgcgcatagagat
ggccagcaagctctccatctgtatcggcaactcaatatgcggatgcccttgaatgtgtta
cctactggtgggaacctatcaagtcagccgtgtaaggaagaaggaacaaacaatagtggt
ggctcaatttatgtgggaaacattcatgtggctaatagttcgtcatcttcatcaccaccg
ctgccattgccatcatcatcaaggagcaagttatatggtctctcagccgtggtggagcac
tatgggaaatgcggaggagggcattacgctgtttacaagggaataacatcgaattctaat
gctaatgatccagggcgacctcctgcaggtcttggcaagcggtggttttacatctcagat
ggtcacgtatcgcaagtttcagaggatgatgttttgggtgcggaggccaccctccttttc
tatgaaagattgtag
DBGET
integrated database retrieval system
