Phragmites australis (common reed): 133889029
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Entry
133889029 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133889029
KO
K14416
elongation factor 1 alpha-like protein
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133889029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133889029
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133889029
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
133889029
NCBI-ProteinID:
XP_062185449
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All DBs
Position
13:complement(31122491..31124368)
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AA seq
377 aa
AA seq
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MDESTDERERGITMTVAVAYFDTEKYRVVLVDSLGHKDFVPNMISGATQADAAVLVVDVY
RGSFEAGMGVNGIGQTKEHSQHIRSFGVENLIVAVNKMDLVGYSKERFSFVQLQLGIFLR
SCGYKDCSITWVPLSAMANENLVTAASDSRLLSWYNGNCLLKAIDSLPPPHRDVSRPLHL
PICDVIASHTLGQVAVCGKVETGGIRTGSKVLVMPSGDLATVRTIERDSSSCNLARAGDN
IAFGLQGIEPGHVVSGGVLCHPDFPVPVVSSLELKILVLEITMLILVGLQFELHIHHARV
SASLVKILSLLDQKTGKASKKRPRLLTTRQAAIVEVKLDKEVCVEEFSTLKALGRVFLRS
QGNTIAVGIVTRKLDQA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcactgatgagagggagcgtggcattacaatgactgtggctgtagcatac
tttgacaccgaaaaataccgtgtagttttggtcgactcccttggtcacaaagattttgtt
cctaatatgatatctggcgctacacaggctgatgcagctgtcctagttgttgatgtatat
agaggctcatttgaagcaggtatgggtgttaatgggattggtcagacaaaggagcactca
caacatattaggagctttggtgttgagaacttgatagttgctgttaataagatggatctg
gtgggatattcgaaagagcggtttagttttgtgcaattgcaacttggtatctttcttcga
tcatgtgggtacaaagactgttcaatcacctgggtccctttgagtgcaatggcaaacgaa
aatttagtgacagctgcttcagattctcgtcttttatcatggtacaatggaaattgtctg
ctgaaagccattgactcattacctcctcctcatcgtgatgtttcaaggccactacacctt
ccaatatgtgatgttattgcatcccacacactggggcaagtggcagtttgcggtaaagta
gagactggaggaatccgaactggttccaaggttcttgtcatgccttctggagatttagct
acagtaagaaccattgagcgggattcctctagctgcaacttggctcgagctggggacaac
attgcttttggtttgcaagggatcgaacctggtcatgttgtgtcaggtggagttctttgc
catccagatttccccgtgcccgtcgtgtcttccttagagctgaaaattctggttctagaa
atcactatgctaatactggttggccttcagtttgagctgcacatacatcatgcgagggtg
tctgcaagcttggttaaaatactgtcattgttggaccagaagactggcaaggcctctaag
aaaaggccacggttgctcactacgaggcaggctgctatagttgaagtaaagctggacaaa
gaagtctgcgtggaagaattctcaacactgaaggcccttggccgagtgttcctgcgatct
cagggcaacaccattgccgtgggcattgtgacccgaaaactggatcaggcttag
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