Phragmites australis (common reed): 133889050
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Entry
133889050 CDS
T10575
Name
(RefSeq) calmodulin-binding transcription activator 4-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133889050
Transcription factors [BR:
paua03000
]
Eukaryotic type
Other transcription factors
Others
133889050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
IQ
Ank_2
Ank_4
Ank
TIG
Ank_3
W2
Autophagy_act_C
DUF2497
Motif
Other DBs
NCBI-GeneID:
133889050
NCBI-ProteinID:
XP_062185476
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All DBs
Position
13:14115964..14129383
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AA seq
1032 aa
AA seq
DB search
MSQSFDINVLREEARTRWLKPSEVYYILQNHERLPITHEPPKKPLSGSLFLYNRYVNRYF
RRDGHVWRRKKDGRTVAEAHERLKVGNVDALSCYYAHGEQNPCFQRRCFWMLEPAYEHIV
LVQYREVAEGRYYSSQLSNGPPESLSSLRYPNAICGNKYRSSTSAVSGGGESHQSYSTLS
SVTEVSSYSGNKEYNKDGGSLLSIPELGQTCLEQTTEVCQTDNGNSTNKSGLNVALKKIA
EQLSLGDDDDDHIYSNQAQALGFTADIEAAGDNQVKQIRPEGTQNGLLPYSGDNQGKQIQ
PEGTQNGLGRDIAPSWEDVLHSSSGLPTSSIYQSDVRYQPNSEYQPPGGLDSSDLRIQLS
AAKRFLLGPEDSIDSPSMNFILRNKGNGGTDTFSAHDSRVESSLDPNWKTKTSRTSQSDS
QGSEITELLFDHGQFEPYSRADTRLTLEQKQQFNIREISPEWAFSYEITKVIITGDFLCD
PWNSCWAVMFGDSEVPAEIVQPGVLRCHTPLRSSGKLTVCITSGDREVCSQVKGFEFRTK
STASSFTDLAPSCRPRKSNEELLLLAKFARMLLCGSGSSEVSGDNPRSGQCPKLKMNDEH
WERLIDELKGGCENPRTTVDWIMEELLKSKLQQWLSAKHQGYDEEACSLSKHEQGIIHLV
SALGFEWALSSVLSAGVGINFRDSNGWTALHWAAYFGREKMIAALLAAGASATAVTDPTA
QDPVGKTAAFLASERGHMGLAGYLSEVSLTSYLASLTIEKSEISKGSAAAEAERAVESIS
QRSAQLHGGTEDELSMKDSLAAVRNAAQAAARIQNAFRAFSFRKRQQKTARLRDEYGMTQ
EEIDELAAASRSYHQTHASSGQFYDKAAVSIQKKYKGWKWRKHFLNMRRNAVKIQAHVRG
HQVRKKYKTFVSTVSVLEKVILRWRRKRHGLRGFRAEQQPMVGAVEEDEDEDDEDDDFDD
DEAVKIFRRQKVDEAVKEAMSRVLSMVDSTEARMQYRRMLEEFRLATVELGGSDKVTSIC
DSDLVGINNFMH
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaagttttgacatcaacgtgcttcgtgaagaagcaaggactaggtggttaaag
ccttctgaagtctactacatcttgcagaatcatgagaggttgccgatcacccatgagcca
ccgaagaagccactcagtggttcactgttcctttataatcgctatgtgaatcggtatttc
cggagagatggccatgtatggaggaggaagaaagacggaagaactgttgcggaggcgcat
gaacgattgaaggttggaaatgtcgatgctctgagttgctattacgctcatggtgagcaa
aatccatgtttccagaggcggtgtttctggatgctggaacctgcatacgaacacattgtg
ctagtacagtatagagaggtggctgagggaagatattattcatcacaactgtcgaatggg
ccaccagaatctctttcatccttgagatatccaaatgccatctgtgggaacaaatatcgc
agctccacttctgccgttagtgggggcggtgaatcccatcagagctattctaccttgagt
tctgtaactgaagtaagttcctattctgggaacaaagagtacaacaaagacggtggcagt
ttactaagcataccagagcttggacagacttgtctggaacaaactacagaagtttgtcag
acagataatggtaattcgacaaataaatctgggcttaatgtggctttgaagaagatagct
gagcagttaagtttgggtgatgatgatgacgaccacatttactcaaatcaagctcaggct
ttgggcttcactgcagatattgaggctgcaggtgacaaccaagtaaaacaaattcgacca
gaaggaacacaaaatggtttgctgccttattcaggtgacaaccaaggaaaacaaattcaa
ccagaaggaacacaaaatggtttaggcagggatatagcaccatcttgggaagatgtgctg
cactccagttcaggtttgccaacttcatctatataccagtcggatgtccggtatcagcca
aattcagaataccaaccaccaggaggcctggacagtagtgatttgcgcattcaactttct
gctgctaaaagatttcttttaggaccagaagattctattgactcaccatctatgaacttt
attttgagaaacaaagggaacggtggaactgatactttttcagctcatgacagtagagtt
gaaagctctctggacccaaattggaaaacaaaaacatcgagaacatctcaaagcgattcg
cagggctctgaaataacagagttgttgtttgaccatggtcagtttgaaccctactccaga
gcagatacaagacttaccttggaacagaagcagcagtttaacattcgtgagatctctcca
gaatgggcattctcctatgagatcaccaaggtcatcattactggagatttcttatgcgat
ccatggaattcatgttgggcagtgatgtttggtgacagtgaggtacctgctgaaatagtt
caaccgggtgttctccgctgccacacaccactgcgcagcagcggaaaactcacggtctgt
attacctctggggatagagaagtttgcagtcaagtcaaaggctttgagttccgtacaaaa
tcaacagcttccagtttcacagaccttgcaccatcttgtagacctcgtaagtccaacgaa
gagttactacttcttgcaaagtttgcaagaatgcttttgtgtgggagtggaagctctgaa
gtttcaggtgataatccccggtcaggacagtgtccgaaacttaagatgaatgacgagcat
tgggagcggttgattgatgaactcaaaggagggtgtgagaatccacggaccacggttgat
tggattatggaggaactgctgaaaagtaaattacaacagtggttatcagcaaaacaccaa
ggatatgatgaagaagcttgttctctgtccaagcatgagcagggcattatacacttagta
tctgcactaggctttgagtgggcattgtcttcagttctcagtgctggtgttggtataaat
ttccgtgattcaaatggatggactgcacttcattgggctgcttattttggaagggaaaaa
atgattgctgcacttcttgctgctggtgcatcggctacagcagtcaccgatcccactgca
caagacccagttggcaaaacagcagctttcctggcttctgaacgaggacacatgggtctt
gcaggctatctttccgaagtgtcactaaccagctatcttgcatccctcactatagaaaaa
agcgagatttccaaaggatcagctgcagctgaggcagagagagcagtggaaagcatatct
cagaggagcgcccaactgcacggtggcacagaagatgagctctcgatgaaggactctttg
gcagcagtgagaaatgcagctcaagcagcagctcgcatccagaatgctttccgtgccttt
tctttcaggaagagacagcaaaagactgctcgacttagggatgaatacggaatgacccaa
gaagaaatagatgaacttgcagccgcatcaaggtcgtaccaccaaactcatgcttcaagt
ggtcagttttatgataaagcggctgtttcaattcaaaagaaatacaaaggatggaaatgg
cgcaaacattttctcaacatgcgaagaaatgcggttaagatacaggctcatgtaagaggc
catcaagtgagaaagaaatacaaaacttttgtaagcactgttagtgtgctagagaaagtg
atactaaggtggcgcaggaaaagacacggcctacgtggcttccgagctgagcaacaacca
atggttggagcagtagaggaagatgaggatgaagatgatgaagatgatgactttgacgac
gatgaagcggtcaagattttccgtcggcagaaggttgatgaagctgtaaaggaggctatg
tcaagagtgctgtccatggtagactctactgaagcaaggatgcagtatcgtcgaatgctt
gaggagtttcgtctggcaactgtcgaattgggtggatcagataaagtaacatcaatatgt
gacagtgacttagtagggatcaacaacttcatgcactga
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