Phragmites australis (common reed): 133889074
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Entry
133889074 CDS
T10575
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133889074
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133889074
PBAF complex
133889074
GBAF(ncBAF) complex
133889074
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133889074
NCBI-ProteinID:
XP_062185513
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Position
13:13631619..13633898
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AA seq
534 aa
AA seq
DB search
MATGGNPNPTATTSQPRLPHPQQQPPPGSSPATPFNHLRPPSLAGSPFQGLFHTPPSHNP
AFQIHMGASSPQTPIMAANAATAAASAKRPPQKPPARPPAPTPSSAAAASAAAAYKAAAA
AAAVANSGGVDLTPAARRNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARK
KVDIQEALKNPPSLQRTLRIYVFNTFANQAPRTIPPPKNADPPTWSLKIIGRVLEDGAEL
DPASVVPKHNPVYPKFSMFFKRVTIALDPSLYPENPLIIWENARSAAQQEGFEVKRKGDK
EFAANIRLEMNYNPEKFKLSQPLMEVLGVDVDTRARVITALWQYIKAKKLQNPSDPSYFM
CDPQLKKVFGEDKLKFAMLSQKISQHLSAPPPINLEHKIKLSGNGAHGSACYDVLVDVPF
PLQKEMMAFLANTEKHKDIEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINAMIAS
QSKDLKLVAGEANKNVEKERRADFYNQPWVEDAVIRYLNRKPASDGPGGGAGGS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggcggcaaccccaacccgaccgccactacctcccagccgcgcctgccgcat
ccgcagcagcagccaccgcccggcagctccccggcgacgcccttcaaccacctccgcccg
ccctccctcgctggctcccccttccagggcctcttccacaccccgccgtcccacaacccc
gccttccagatccacatgggcgcctcctccccgcagaccccgatcatggccgccaacgcc
gccaccgccgcggcatccgccaagcgccccccgcagaagcccccggcgcggcccccggct
cccacgccttcctctgcggcggcggcgtcggcggccgccgcctacaaggctgcggccgcg
gctgccgcggtggcgaactcgggaggcgtcgacctcacgcccgccgcgcgccggaacaag
aagcggaagctaccggagaagcagctccccgaccgcgtcgccgcgctactcccggagtct
gcgctctacacgcagctgctcgagttcgaggcccgcgtggacgcggcgctggcgcggaag
aaggtggatatccaggaggcgctcaagaacccgccctcgctccagcgcacgcttcgcatc
tacgtcttcaacaccttcgccaaccaggcgccacgcaccatcccgccacccaagaacgcc
gacccgcccacctggtcactcaagatcatcggccgcgtgctcgaggacggcgccgagctg
gaccccgccagcgtcgtgcccaagcacaacccagtgtacccgaagttctccatgttcttc
aagagggtgaccattgcgctggacccgtctctgtacccggagaacccactgatcatctgg
gagaatgcgcggtctgccgctcagcaggaagggttcgaggtgaagaggaaaggggataag
gagtttgctgcgaatatccggctggagatgaactataaccccgagaagttcaagctgtca
cagccgctgatggaggtgcttggggttgatgtggacactcgcgcacgggtgattactgcc
ctctggcagtacattaaggcgaagaagcttcagaaccctagtgatccttcgtacttcatg
tgtgatcctcaactgaagaaggtgtttggggaggataagttgaagtttgcaatgctgtca
cagaagatatctcaacatctgtcagctccaccacccatcaacttggagcataagattaag
ctatcagggaatggagcgcacggtagtgcttgctatgatgtgctggtggatgttcccttc
ccgctgcagaaggagatgatggcgtttctcgccaacacagagaagcacaaggacattgag
gcttgtgatgaggtaatatctgcttccatcaagaagatccatgagcatcgaaggaggagg
gctttcttccttggattcagccagtccccagtggagttcatcaatgcaatgatagcttct
cagagtaaagatttgaagctggttgccggcgaagcgaataagaatgttgagaaggaaaga
cgtgctgacttctataaccaaccatgggttgaggacgctgttataagatatttgaaccgc
aagccagctagcgacggcccaggtggtggtgctggtggttcttga
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