Phragmites australis (common reed): 133889284
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Entry
133889284 CDS
T10575
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133889284
Spliceosome [BR:
paua03041
]
Complex A
Other components
Complex A specific factors
133889284
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GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
RRM_5
KH_12
eIF3g
zf-CCHC
zf-CCHC_3
PHD_4
RRM_7
DUF6319
Motif
Other DBs
NCBI-GeneID:
133889284
NCBI-ProteinID:
XP_062185778
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Position
13:13895139..13898629
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AA seq
763 aa
AA seq
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MASAETLARSPSREPSSEPPRAASSEPPREASSEPHHNGDGPGAGTGDSSSRRRRRSRWE
QSNDDSAANSGGEGGTGGRKRKTRWAEEEPRPTIALPDFMKDFAAEMDPEVHALNARLLE
ISRLLQSGLPLDDRPEGARSPSPEPVYDNLGIRINTREYRARERLNRERQEIISQLIRRN
PAFKPPSDYRPPKLQKKLYIPMKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGS
VKEGKLLQKRDLKPDPSENEDLHVLVEAETQEALDAAAGMVEKLLTPVDEVLNEHKRQQL
RELAALNGTIRDDEYCRTCGEPGHRQYACPNKGTTFKSDVHCNICGDGGHPTIDCPMKGT
AGKKMDDEYQNFLAELGGGSAPESMTKSSGPMLALTGSGGSGGSTTGSGNNPPWSAGGSV
APTWANGIKKEYDETNLYIGYLPPTMDDEGLISLFSHYGNIAMAKVIKDRNTGQSKGYGF
VKYDDVSQANAAIAAMNGHHLEGRIIAVRVAGKPPQPAVPTGPPAAPLPPSYPHMVPASG
GYSSQPYMGAPPPPPAPPGSYAPVPWGQPPQYASYPPPPPGSSMYNSAPPPPGQTAPPPY
GVQYPPPPALVPPPGTAPSSDGAQNYPPGVTPPSSGAPTQPVSAPVYGSSGAPNVPPMYP
PPPYSYAPYYPVVTPLQPPPPPPPPPASVDPSQSIATAPWATHNAPPPPPPPASVDPAQS
IATAPWATHNAPPPPPPLSSTTDQPTATYGADAEYDKFMSEMK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgccgaaaccctagcccgctccccatcgcgcgagccctcctccgagccaccc
cgcgccgcctcctccgagcccccgcgcgaggcctcctcggagccccaccacaacggcgat
ggccccggcgcgggcaccggggactcctcctcccgccgccgccgccgcagccgctgggag
cagtccaacgacgactccgccgccaactccggcggcgagggcgggaccgggggccggaag
cgcaagacgcggtgggccgaggaggagccccgccccaccatcgcgctaccggacttcatg
aaggacttcgccgccgagatggaccccgaggtgcacgccctcaacgcgcgcctcctcgag
atctcgcgcctcctccagtcgggcctgcccctcgacgaccgccctgagggcgcgcgctcg
ccctcgcccgagcccgtctacgacaacctcggcatccgcatcaacacccgcgagtaccgc
gccagggagcgcctcaaccgcgagaggcaggagatcatctcccagctcatccgccgcaac
cccgccttcaagcccccttccgattaccgcccacccaagctccagaagaagctctacatt
cccatgaaggagttccccgggtacaactttatcggtctcatcatcggccctcgtgggaac
acgcagaagcggatggagaaggagactggtgctaagatcgtcatccgggggaagggcagt
gttaaggaagggaagctgctgcagaagagggaccttaagccggatcccagcgagaacgag
gacctccacgtgctagttgaggccgagactcaggaggctctggatgccgcagctggcatg
gtggagaagctgctcaccccggtggatgaggtactgaacgagcacaagcggcagcagctg
agggagctcgccgcgctcaatgggacgattagggacgatgagtattgtaggacatgcgga
gagcctggtcaccggcagtatgcgtgccccaacaaggggaccacatttaagagcgacgtg
cattgcaatatctgtggggacggtgggcacccgacgattgattgtccaatgaagggcacg
gctggcaagaagatggatgatgagtaccagaacttcctggctgagcttggtggtgggagt
gcacctgagtcgatgacaaaatctagtggtccgatgttggctcttacaggaagcggtggt
agcggtggttctaccactggtagtgggaataaccctccttggtctgctggtggcagtgtg
gctcccacttgggcaaacgggatcaagaaagagtatgatgagacaaatctgtatatcgga
tacttgccacctacaatggatgatgaggggctgatcagtttgttttcgcactatgggaat
attgccatggcaaaggtgatcaaggatcgaaatacagggcagagcaaaggatatggattt
gtcaagtatgatgatgtctcacaagctaatgcagcgattgctgcgatgaacggtcaccat
cttgaagggagaattattgcagttagagttgcgggcaagccaccgcagccagctgttcca
actggtccaccggccgctccattgccaccgtcatatcctcatatggttcctgcttctggt
ggatactcctcgcagccctacatgggggcaccaccaccaccgccagcacctccagggagt
tatgctccagtgccttgggggcagccacctcaatatgcttcatatcctccgccaccacct
ggctccagcatgtataactctgcacctcctccgccaggccagactgccccacctccatat
ggtgtgcagtacccaccaccaccagctctggtccctccaccaggcactgctccatcaagt
gatggagcacagaactaccctccgggtgtaacaccacctagttctggtgctcccactcaa
cctgtatcggctccagtatatggatcctctggtgcaccaaatgtgccacctatgtaccct
ccaccaccttatagttatgctccatattatcctgtagtgacaccacttcagccaccgccg
ccaccgccaccaccaccagctagtgttgatccatctcagagtattgcaactgcaccatgg
gccacccacaatgcaccgccgccgccaccaccaccagctagtgttgatccagctcaaagt
attgcaactgcaccatgggccacccacaatgcaccgccgccgccaccacctttgtcctcc
accaccgaccagcctactgctacctatggtgctgatgcagagtatgacaagtttatgtca
gagatgaagtga
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