Phragmites australis (common reed): 133889330
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Entry
133889330 CDS
T10575
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133889330
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133889330
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133889330
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133889330
03036 Chromosome and associated proteins [BR:
paua03036
]
133889330
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133889330
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133889330
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133889330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
MA-Mit
Motif
Other DBs
NCBI-GeneID:
133889330
NCBI-ProteinID:
XP_062186078
LinkDB
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Position
1:complement(889818..892901)
Genome browser
AA seq
488 aa
AA seq
DB search
MWKQFIGKLSWKSMKSSSGGGGGGSPPAKPPPLSLRENGAAGKPNVSPPSAAGGAGAEVR
SREDAFVQKVNICCVVFDFSDRGKDSPEKERKRQMLMSLVDCIGAAEEPLTEVMISACVR
MFAVNLFRVFPPKVRSGTAASETEEDEPFFDPSWYHLQVVYEFLLRFVTSPFVDPKVARK
YVDSTFVSRLLDLFDSDDPRERDCLKTILHRIYGKFMGNRPFIRKAVSNIFYRFVFEADH
HNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKTVGVYLPQLTYCITQFIEK
EPKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCIVPLFRRIANCLNS
SHFQVAERALFLWNNEHLFDMISQNRQVILPLIYPALERNTRWHWNQSVLNVTMNVRKMF
LDMDEKLLLACQSNFQEEEEKRAATAERRRLMWEQLERNAAHGYQPVIADASFPAPHSLG
RLVAPTVT
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaatttattggcaagctgtcgtggaagtcgatgaaatccagctctggcggc
ggcggagggggatcgccgccggcgaagccgccgccgctgtctctccgggagaatggggcc
gcggggaagccgaacgtctcgccgccgtcggccgcagggggcgctggagccgaggtgagg
tccagggaggacgccttcgtccaaaaggtgaacatttgctgcgtggtgttcgacttctcc
gaccggggcaaggactcgccggagaaggagaggaaacggcagatgctcatgtctctggtc
gattgcattggcgccgccgaggagcccctcacggaggtgatgatctcggcttgcgtgcgc
atgttcgctgtcaaccttttcagggtctttccgcccaaagtccggtctggaactgcggct
tcggagactgaggaggacgagccgttctttgatccgtcctggtaccaccttcaagttgtg
tacgagtttctccttaggtttgtgacctcgccattcgtcgatcccaaggtagctaggaag
tatgtggatagtaccttcgtttcgaggctgctcgacttgtttgattctgacgacccgaga
gagagggattgcttgaagacgatattacataggatatatggcaagttcatgggaaaccgt
ccattcatccgtaaggccgtgagcaatatcttctataggtttgtgttcgaggcggatcat
cacaatgggattgctgagctgttggaggtgtttggcagcgtaataagtgggtttgcgaag
ccattgaaggaggagcataagttgttcctatggaaagcattgatcccgcttcataagcca
aaaacggtgggagtgtatctgccgcagctgacatattgcattacacaatttattgagaag
gaaccaaagcttgccgggactgtgattagaggcctgttgaagtattggccggttacaaat
agtcagaaggaaatgatgttcttgggggagttggaggaggtgctggagttgactgacatg
gctgaatttcagaagtgcattgtccccttattccggaggattgcgaattgcctgaatagc
tctcattttcaggttgctgagagagctttattcctatggaacaatgagcacttgtttgat
atgatctcccaaaaccgtcaagtgattctaccgcttatatatccagctctggagaggaat
acccgttggcactggaaccaatcggtcctcaacgttacgatgaacgtgaggaaaatgttc
ctcgacatggatgagaaattgctcctggcttgtcagagcaatttccaagaggaagaggag
aagcgagctgcgaccgcggagcggcgaaggcttatgtgggagcagctggagcggaatgct
gcccatgggtaccaaccagtgatcgccgacgcaagctttccggcaccccattcattaggt
cgccttgttgcccccactgtgacgtga
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