Phragmites australis (common reed): 133889350
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Entry
133889350 CDS
T10575
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133889350
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133889350
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133889350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-C3H2C3
zf-ANAPC11
zf-RING_Vps41
VPS18_RING_C
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133889350
NCBI-ProteinID:
XP_062185859
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All DBs
Position
13:25699256..25703369
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AA seq
245 aa
AA seq
DB search
MLRATTGKKEVAVCYMNGPLPYAIEENYSGCFFDDDDDLAQVLQDQEILYQLIQGNGGGG
SSITHSAPSSSYGHDQTSNERKPSGVANYDLQLAVDEGLARELQEMEGQLANTSLNGNNG
KIPTTSSPSDNGNSSATRPPQVAVEDDIDPDNMTYEELQQLGEAIGTESKGLPESVIALL
PTSTYKIGIFSRKEKHECVICCMVFKNRDRLTKLPCEHQYHQTCVTKWLQINKVCPVCNK
EVFGS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgctacgtgctacaactgggaagaaggaagtagctgtctgttatatgaatggcccttta
ccgtacgccattgaagagaattacagtggatgcttctttgatgacgatgatgatcttgct
caagttcttcaagatcaggaaatattgtatcaactaattcaaggaaatggtggtggtggt
tcgtctataactcattcagctcccagttctagctatggccatgatcagacatcaaatgaa
cgaaaaccatcaggagttgcaaactatgatttgcaactagcggttgatgaaggtttagct
agagagttgcaagagatggagggccaactagccaacacttcacttaatggcaataatgga
aaaattccaacaacttcttcaccatccgataatggcaatagttctgcaaccagacctcct
caggtagcagtggaggatgacattgatccagataatatgacttatgaggaactgcaacag
ttaggggaagccattggtaccgaaagcaaagggctgcctgaaagtgtcatagcgctcttg
ccgacatcaacttacaaaattgggatattctcaagaaaggaaaaacatgaatgtgtgatc
tgctgtatggttttcaagaaccgagataggctgactaaattgccctgcgaacatcagtac
catcaaacttgtgtcactaaatggttgcagatcaataaggtatgccctgtttgcaataag
gaggtttttggctcgtaa
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