Phragmites australis (common reed): 133889354
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Entry
133889354 CDS
T10575
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133889354
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
paua04812
]
133889354
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133889354
Cytoskeleton proteins [BR:
paua04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133889354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Adaptin_N
TOR1L1_N
HEAT_2
PDS5
TTI1
Sec7-like_HDS
UTP20
INTS1_R4
Dopey_N
HEAT_DAAF5
MMS19_C
TAF6_C
RRN3
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
133889354
NCBI-ProteinID:
XP_062185862
LinkDB
All DBs
Position
13:complement(21736141..21752483)
Genome browser
AA seq
1455 aa
AA seq
DB search
MEAALEAARAKGTKERLAGLERLHEALDAAARRGLTATEVTALVDTCLDLTRDANFRVAQ
GGLQALSAAAVVAGEHFKIHLNALVPAAVERLGDGKQPVRDAARQLLITLMEVSSPTIIV
ERAGSYAWTHKSWRVRDEFVRTVATAIGLFASTEISLQRVLLSPVLQLMNDSNQSVREAA
ISCIEEMYKHMGSQFHEELQRHNLPSYMLKEINSRLDKIEPKVRSSDPVMQYKVAESRSV
SANPKRGSPRTKSSSRESTLFGGDTDITEKPVEPVKVHSEKELLREFEKIAATLVPEKDW
SLRIAAMQRIEALVYGGAIDCPSFLVLLKQLVQPLSTQLSDRRSSIVKQACHLLNILSKE
LLGDFEPCAEIFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARILPRIADTAKNDRS
AILRARCCEYALLILEYWADAPEIQRSADLYEDMIKCCVADAMSEVRATARTCYRMFLKT
WPERSRRLFMSFDPAIQRIINDEDGGVHKRYASPSLRDRVVQPSRASSHASGTHMPGYGT
SAIVAMDKSAAISSDSSFSSNSLRLSQSKTIGRSSERSLESVLNSSKEKVSAIESLLKGI
SISDRQNFSAARSTNFDLGVDPPSSRDPPVPLAAPASNLLSLQNSALLDSSLPTITGATS
RNGGSRLLDTMTTQLATKERSRSPYLSNISSESMSGLSLPYFRRSSERLQEGGRMDESND
IRSTRRIPQMHMEKNYVDMPYRDATHRDSHNNHVPNFQRPLLRKQVMSRASASGRHSFDD
SHVPLGDVSGYADSLVSLNDALSEGLSPSSDWVARVSAFDFIRNLLQQGQKGIQEITQNF
EKVMKLFFRHLDDPHHKVAQAAFSTLAEIIPACKKPFESYVERILPYVFSRLIDPKELVK
KPCSSTLEIVGRTYAIDMLLPALVRSLDEQRSPKAKLAVIEFANKSFSKYTVDSDGYSNS
GFLKLWLSKLAPLVNEKNAKLKEASINGIISVYSHFDSTAVLNFILSLSVEDQNLVRRAL
KQYTPRIEVDLVNYLQSKKERPRPKSFDQADFGTSSDDGYALTSKKSYHFGRYSSSSLDA
EGGKKMGATQESTLHNVSIGRTTSDMSIDHAIQSLEPSTGNEVLLTRSRESKNSSSSVVE
AARSWTNYPEKSDVSLDVEPATGTPRVDFSRLLTSDRHNTVGSTTGESVQEGDTIVSLSS
IKTSLHTDNSSIKASLHTDNGLSIPQLLHQISNDTEVSSLEKREALQQLVNASLDNNNSI
WAKYFNQILTAVLEVLDVSDSSTRELALSLIAEMLNNQKDAIEDSIEIVLEKLLHVTKDV
VVKISNEANRCLNILLGKYDPSRCLAVIVPLLVSDDEKILVVCINCLTKLVGCLSQEELI
DQLPTFLPALFDAFNNQSPDVRKTVVFCLVDIYIILGKAFAPYLEGLSSTQLRLVTIYAN
RISQARSGKPIGSNQ
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgccaagggcaccaaggagcggctggccgggttg
gagcggctgcacgaggcgctggacgcggcggcgcggcgggggctgacggccacggaggtc
acggcgctggtggacacctgcttggatctgacgcgggacgccaacttccgcgtcgcgcag
ggcgggctccaggcgctctccgccgcagccgtggtcgccggcgagcactttaagatccac
ctcaacgctctggtccccgccgccgtcgagcgcctcggcgacggcaaacagcccgtccgt
gatgccgcgcggcagctcctcattaccctgatggaggtttcttcgccaacaatcattgtt
gaaagagctggaagttatgcatggactcataagagttggagggtgcgggacgagtttgta
cgtactgtggcaactgcaattgggctatttgcttctacagagatctccttgcaacgagtt
ttgctttcacctgttttgcaattgatgaatgattcgaaccaaagcgttagagaagctgct
atctcttgtattgaggagatgtacaagcacatgggatcacagtttcatgaagaattgcag
cgccataatctgccttcgtacatgctaaaagaaataaattcaaggctggataaaatagaa
ccaaaggttcgatcatctgatcctgtaatgcagtataaggttgcagaatctagatcagtt
agtgctaatccgaaaagaggcagcccaaggacaaaaagctcatcaagggaaagtacattg
tttggtggtgacaccgatataacagaaaaaccagtggaaccagtgaaagttcattccgag
aaagaattacttcgggagtttgagaagattgcagctacccttgttccagaaaaggattgg
tctttacgtattgctgccatgcaaaggattgaagccctggtctatggaggtgctattgat
tgcccatcatttcttgtgctgttgaagcaactggttcaaccattgtccactcagctgtct
gatcgacgttctagcattgtaaaacaggcatgtcatctacttaatatactatccaaagaa
ctccttggtgactttgagccatgtgctgaaatattcatcccgatgctttttaagcttgtt
gtcataactgtgcttgtaatcgcggaatctgcggacacatgtataaaaactatcctacgg
aactgcaaggttgcacgaattctacctcgcatagctgatacagcaaagaatgaccgaagt
gcaatccttcgtgcaaggtgctgtgagtatgcacttctaatattggagtattgggcggat
gccccagaaatacaacgttcagctgatttatacgaagatatgataaaatgctgtgtggca
gatgcgatgagtgaggtccgcgcaactgcaagaacttgctatagaatgtttttgaagaca
tggcctgagcgctcacggcggctttttatgtcattcgatcctgctatacagaggataata
aatgatgaagatggtggtgtgcacaaaaggtatgcttctccctcgttgcgtgatagggtt
gtgcagccttctcgtgcttcatctcatgcaagcggtacacatatgcctggatatggcact
tcagctattgttgcaatggacaagagtgcagctatttcttcagattcatctttttcatca
aacagtcttcgcttatcacagtcaaagacaattggcagaagttctgaaagaagcttggag
agtgtgctgaactccagcaaagaaaaagtttctgccattgaaagtttgctgaaaggtatc
agcatatcggataggcaaaatttctctgctgcacgctcaacaaactttgatcttggagtt
gatcctccatcctctcgtgatcctcctgtgccgcttgcagcaccagcttcaaatcttctc
tccttgcagaactcagcactgttggattcatcccttcctaccatcacaggtgctacttca
cgaaatggaggttcccgcttattggatacaatgacaacacagttggccaccaaagagcga
tcaagatcaccatatttgagtaatatatcgtccgagtccatgtctggcttatctctgcct
tactttagaagatcttcagagaggcttcaagaaggaggccgcatggacgaaagtaatgat
atccgctcaactaggcgaatcccacaaatgcacatggagaaaaactatgttgatatgcct
tatagggatgccacccacagagattcacataataaccatgtcccgaatttccagagacct
ctcctaaggaagcaagtaatgtcaagggcttctgcaagtggcaggcacagctttgatgat
agccatgtaccgttgggtgatgtgtctggctatgcagattctctagtttctctaaatgat
gcactttctgagggtctcagccctagttcagactgggtagcaagagtttcagcttttgat
tttattcggaatttactgcaacaaggccagaaaggtattcaagaaataactcaaaatttt
gaaaaggtcatgaagctttttttccgtcatttggatgatcctcatcataaggttgcacag
gcagctttctctacacttgcagagattattccagcttgcaagaagccatttgaaagttac
gtcgaaagaattttgccatatgtattttcccggcttattgatccaaaggagttggtgaaa
aagccatgctcctcaaccttggagattgttggtcgaacatatgctattgatatgttgcta
cctgcgctagtacgctcattagatgaacagaggtccccaaaggcaaaattggctgttatt
gagtttgcaaataaatcattcagcaagtacactgtagattctgatggttatagtaacagc
ggcttccttaaactatggctttcgaaattggcacccttagtaaatgaaaagaacgctaaa
ttgaaggaggcatctataaatggtatcatatctgtttattctcactttgattcaacagct
gtgctaaattttattctgagtttatcagttgaagatcaaaacctagtgaggagagcccta
aagcagtacaccccacgtattgaggttgatctagtgaactacttgcagagcaagaaagag
cgtccacgccctaaatcttttgaccaggcagattttggaacttcttcagatgatggctat
gcactgacatccaagaagagctatcattttgggcggtattcttctagttcccttgatgct
gaaggtggaaagaagatgggtgcaacacaggaatcaacgctgcataatgtctctataggt
agaacaacttctgatatgagcatagatcatgctattcaaagcttggaaccctccacagga
aatgaagttcttttaactagaagtagagaatcaaagaacagtagtagctcagttgtggaa
gctgcacgttcttggacaaactatcctgaaaaatctgatgtctccttggatgttgaacct
gctactggtactcctcgggtagacttcagccggcttctcacttctgacaggcataatact
gttggttcaaccactggagaaagtgttcaagagggagatacgattgtgagtcttagttct
ataaagaccagcctacatactgacaatagttctataaaggccagcctacatactgacaac
gggctgagcataccacaacttcttcatcagataagcaatgatactgaagtttcaagcttg
gaaaagcgggaagcattgcaacagttggttaatgcttcccttgataacaacaactccatt
tgggcaaagtacttcaatcaaatcttaacggctgtgcttgaggtactggatgtctctgat
tcatccacgagggagcttgctttatctttaattgctgagatgctcaacaatcagaaagat
gccattgaagactctatcgaaattgttctagaaaaactcctgcatgtgactaaagatgtg
gtggtgaagatttcaaatgaggcaaaccgatgcttaaatattctgcttggaaaatatgat
ccttccagatgtcttgctgttatagtacctctattggtcagtgatgatgagaagatactt
gtcgtgtgtatcaactgtttgacaaagcttgttgggtgcctttctcaagaggaactgatt
gatcaattgcctacattcttgccagcactatttgatgcttttaataaccaaagtccagat
gttcgaaagactgttgtgttctgcttggtggatatctatatcattcttgggaaagcattc
gctccatacttggaagggcttagcagcacgcagttgcgcctagtaactatctacgctaac
cggatttcacaggcaaggtctggtaaaccaattggctcaaaccaatga
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integrated database retrieval system
