Phragmites australis (common reed): 133889379
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Entry
133889379 CDS
T10575
Name
(RefSeq) DNA repair protein RAD5B
KO
K15505
DNA repair protein RAD5 [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Brite
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Rad6 epistasis group
133889379
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133889379
NCBI-ProteinID:
XP_062185900
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Position
13:6002063..6008334
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AA seq
1131 aa
AA seq
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MVGRGDDDSRWPESPSQAVLFADEIAAVRAVLGSALPEVRVVATLSRCGGNTERAINALL
DNDAAVDTKKARPVKAERDVSGAAAQAPAQSLVKVKADAPDEVLGSQDSDGSSAKAAVNV
KSEPIDSPVKDPSSIPLHRVKEERCDGDGPKKGPGAVASGGGISLVPRPKKRPREDAVVT
IDLTMTHPVPYLNPRPIRALPPPEVRDVEMHDPSPLMAIAPAPVSDWRMVVAPPEPEFGN
FPEERDWFLLGKSYVTGLSTNRGRRMIDAGEIVGFTFPSYERIYGGVKVSAKKAATLAEI
VRFSTKRAGEIGKLSPEWTKIIVPLVNSSKVKIQGKIVFPTMELRLMQEILLYVSFYVHS
SVFTQGELSSWNTLAPASVGYAANPLHWLFDHLNLRTSNKDDFSLDDLSTRKLKQILRGN
HNSSDESIPVLGQTFPEQSTDEQAISEAALNKIVGTAETYNLEEAEPPSTLVSVLKPYQK
QALFWMSKLEKGMDANEATRTLDPCWSAYNIVDKRAPPVYVNLFTGQATTQFPSVTETTR
GGILADAMGLGKTVMTIALILSDPRGECSNYIERDMRDPRDHTIRACTLRSSIRGGTLIV
CPMALLGQWKDELEAHATQGALSVFVHYGGDKTDDLVLMARHDVVLTTYGVLSATYKTDY
RSMFHMIDWYRIVLDEAHTIKSPKTKVAQAAFGLTSQCRWCLTGTPLQNNLEDLYSLLCF
LHVEPWCNANWWQKLIQKPYENGEASGLKLVRAILRPLMLRRTKETKDKTGNPILVLPPA
HIEVVECEQSEHEHDFYEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCNHPFL
VISRADTQKYADLDKLAQRFLEGVQSYSRRQNALPSRAYVEEVVEEIRQGATTECPICLE
SASDDPVLTPCAHRMCRECLLSSWRTPAGGPCPLCRSHISKSDLIILPAQCRFQVDAENN
WKDSCKVSKLIMILQDLQKKREKSIVFSQFTSFFDLLEIPFSHKGIKFLRFDGKLSQKHR
EKVLKEFSESEDKLVLLMSLKAGGVGLNLTAASNVFLMDTWWNPAVEEQAIMRIHRIGQK
RTVQVRRFIVKDTVEERMQQVQVRKQRMISGALTDDEVRGARIEHLKMLFT
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccgtggcgacgacgactcccgctggccggagtctccctcccaggcagtcctc
ttcgccgacgagattgccgccgtccgcgccgtcctcgggtccgccctccccgaggtccgc
gtcgtcgccacgctgtcccggtgcggcggcaacaccgagcgcgccatcaacgcgctcctc
gacaacgacgccgcggtcgataccaagaaagctcgtccggtcaaagcagagcgcgacgtt
agcggtgccgccgctcaggcgccggcgcagtctttggtgaaggtgaaggctgatgccccc
gacgaggtcttggggagccaagattccgacggctcctcagcgaaggccgccgtcaatgtc
aagagcgagccgatcgattcgcccgtcaaagatccttcttcgattccgctgcaccgggtc
aaggaggagaggtgcgacggcgacggacccaagaaaggccccggtgcggtggcgagcggc
ggaggtattagcctcgtgccgaggccaaagaagaggccgcgggaggacgcggtggtgacc
atcgacctcacgatgacccacccggtgccgtacctgaatccgaggcccatccgggcgctg
ccgccgccggaggtcagggacgtggagatgcacgacccgtcgccgctcatggcgattgcg
cctgccccggttagcgattggaggatggttgtggcaccgccggagcccgagtttggcaac
ttccccgaggagcgcgactggttcctcctcggcaagtcctatgtcaccgggctgtccacc
aaccgtgggaggaggatgatagacgccggcgagattgtcggtttcaccttcccctcgtac
gagaggatctatggcggggtaaaagtgtcagccaagaaggcggcgacactggcggagatt
gtacgcttctccaccaaacgagccggagagattgggaagctgtcaccggagtggacaaag
atcattgtcccgcttgtgaactcgtccaaggtgaagattcaggggaagattgtgttcccg
acaatggagctcaggctgatgcaggagattttgctgtatgttagcttctacgtccacagc
tctgtgttcactcaaggtgaactctcatcctggaatacgctcgctcctgcaagtgttggt
tatgctgccaaccctcttcattggttatttgatcatctgaatctaaggacgtccaacaag
gatgatttctctctcgatgacctcagcacaagaaagctgaagcaaattctaaggggtaac
cacaacagcagcgatgaatccattcctgtgcttggccaaacttttccagagcaaagcact
gatgagcaggctatttcagaagctgccttgaacaaaattgttggcactgctgaaacttac
aacttggaggaagcagagcctccaagtactcttgtctctgttctaaaaccgtaccaaaaa
caagctctcttctggatgtctaaattagagaagggaatggatgccaacgaagcaacaaga
actcttgatccctgctggagtgcctacaatatcgttgacaagagagctcctccagtgtac
gttaatcttttcaccgggcaagcaacaacacaatttccaagtgtaactgagactacacga
ggagggatactagcagatgcaatgggtcttggcaaaactgtcatgaccattgctctgata
ctttcagatcctaggggggagtgttccaactatatagaaagagatatgagggatccgaga
gatcatacgatcagggcatgcaccttgaggtcctctataagaggaggtacccttattgtt
tgcccgatggcattattgggtcaatggaaggatgaattggaggcacatgcaacacaagga
gctctttctgtgtttgtacactatggtggtgataaaactgatgaccttgtactgatggct
cggcatgatgttgtcttaacgacctatggtgtcctttcagccacatacaaaactgattac
agaagcatgtttcacatgattgattggtataggattgtgcttgatgaagctcacacaatc
aaatctcctaaaacaaaagtggcccaagcagcttttggattaacctcacaatgcagatgg
tgccttacaggcacaccattgcaaaataatttggaggacctctacagtcttctctgcttc
ctacatgttgaaccatggtgcaatgcaaactggtggcagaagttgatccagaaaccttat
gagaatggtgaagctagtggattgaaacttgttagagctattcttaggccactaatgctg
aggaggaccaaggagacaaaagacaagacgggaaatcccatactggttctccctccagct
catattgaagttgtggaatgcgaacaatcggaacatgagcatgatttctatgaagcactt
ttcaggagatcaaaggttcagtttgacaaatttgtagcacaaggcagtgttcttaacaac
tatgctaatattcttgagctacttctccggctaaggcagtgctgcaatcacccttttcta
gttatcagccgagctgatactcaaaagtatgctgacctcgacaagctagcacagcgtttc
cttgaaggagtgcaaagttattctagaaggcagaatgcgctaccgtcacgtgcgtatgta
gaagaggttgttgaagaaattcgtcagggtgctactaccgagtgccctatctgccttgaa
tcagcttctgatgatcctgtgctcacgccttgtgcacaccggatgtgccgtgagtgcctt
ctttctagctggaggactccagctggagggccatgtccgctctgtcgaagtcacatcagc
aaatctgacctgatcatactgcctgctcagtgccgcttccaggttgatgccgaaaataac
tggaaggactcgtgcaaggtgagcaaacttatcatgatcctgcaggaccttcagaagaag
agggagaagagcattgtattcagccagtttacttcattctttgatcttctggagatcccc
tttagtcataagggtatcaagttcttgaggtttgatggcaagctgagccagaagcataga
gaaaaagttctgaaggaattcagtgaaagtgaggacaagctggtgctactgatgtcactc
aaagctggaggtgtagggctaaatctaactgctgcctccaatgtttttctgatggataca
tggtggaatcctgcagtggaagagcaggccattatgagaattcaccgtattgggcagaaa
agaacagtccaagtgagacgtttcatcgtcaaggatactgttgaggagcggatgcaacag
gtgcaagtgcgcaagcagaggatgatttctggggcgttgacggacgatgaagtccggggt
gctcgcattgagcatctaaagatgctgttcacgtga
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