Phragmites australis (common reed): 133889783
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Entry
133889783 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133889783
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133889783
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133889783
NCBI-ProteinID:
XP_062186241
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Position
13:25297822..25304239
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AA seq
589 aa
AA seq
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MASNSSAAAFFGIRDGDQQDQIKPLISPQQQQLAAALPGVASAAPAASGHGAPTAAPPPP
KKKRTLPDPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNP
LQVQRRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWK
AHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTSLSSLTSHLYGATNA
GNMALSLSQVGSHLTTTLQDGHHHHQSPELLRLGGTGGGSSIAARLDHLLSPSGASAFRP
PQGPPSSAFFLNAAAAAGQDFGDDAGNGPHSFLQAKQFHGLMQLPDLQGNGAGGPGTSGP
SLFNLGFFANNGNSPGSSHEHASQGFMNNDQFSGGAGGGCGGGGPEASAAGIFGGNFVGG
GDHVPSAGLYNDQAAMLPQMSATALLQKAAQMGATSSANGAASMFRGFVGSSPHMRPAAP
HMEQSEANLNDLMNSLAAGGVSARGMFGGSNGGGGAGMFYPRQLCDMEAHEVKFGQGGGD
MTRDFLGVGGGGIVRGISTPRGDHQSSSDMSSLEAEMKSASSFNGGRIP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggctgcagcgttcttcgggattagggatggggaccagcaagac
cagattaagccgctgatatcaccgcagcagcagcagctggcagcggcgctgcccggcgtg
gcatccgctgcgcccgcggcgtccggccatggcgcaccgacggcggcaccgccaccgccc
aagaagaagagaactttaccagaccccgacgccgaggtgatcgcgctgtcgccgaagacg
ctgatggcgacgaatcggttcgtgtgcgaggtgtgcaacaaggggttccagcgcgagcag
aacctgcagctgcaccggcgcgggcacaacctgccgtggaagctgaagcagaagaacccg
ctgcaggtccagcgccgccgcgtctacctctgcccggagccgacgtgcgtacaccacgac
cccgcccgcgccctcggcgacctcacggggatcaagaagcacttctgccgcaagcacgga
gagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtgcagtccgactggaag
gcacactccaagatctgtggcacccgcgagtaccgatgcgactgcggcaccctcttctcc
cggagggacagcttcatcacccacagggcgttctgcgacgcgctcgcgcaggagagcgcc
cggctaccgccgacgagccttagcagcctcaccagccacctctatggcgccaccaacgcg
ggcaacatggcgctgagcctctcgcaggtgggctcccacctcaccaccactctccaggac
ggccaccaccaccaccagtccccggagctcctccgcctcggcggcacgggcggcggcagc
agcatcgccgcgcgcctcgaccaccttttgtcaccctctggcgcgtccgccttccgcccg
ccgcagggtccgccgtcgtccgcgttcttcctcaacgcggcggcagcggcggggcaggac
ttcggtgacgacgcgggcaatgggccccactcattcctgcaggccaagcagttccatgga
ctcatgcagctccccgacctccaaggcaatggtgcgggggggccaggcacctcggggccg
agcctattcaacctgggcttctttgctaacaatggcaacagcccggggtctagtcatgag
catgcaagccaggggtttatgaacaatgaccagttcagcggcggagcaggtggaggctgc
ggcggcgggggtccggaggcatcggcggcgggtattttcggcggaaacttcgtcggcggt
ggagatcatgttccgtcggcagggctctacaacgatcaggctgccatgctaccgcagatg
tcggcgaccgctctccttcagaaggcggcgcagatgggcgcgacatctagcgcgaacggc
gcagcgtccatgttccgaggcttcgtgggctcttcgccgcacatgcggccggcggcgccg
cacatggaacagagcgaggcgaacctgaacgacctgatgaactcgctcgccgcaggtggc
gtcagtgccagaggaatgtttggtgggagcaacggtggcggcggcgcggggatgttttac
ccgaggcagctgtgcgacatggaggcgcacgaggtgaagttcggccagggcggcggcgac
atgacgcgggacttcctcggcgtgggaggaggtggcatcgtgcgcgggatctcgacgccg
agaggggaccaccagagcagcagcgacatgagctccttggaggccgagatgaagtcggcc
tcgtccttcaacggaggcaggataccatga
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